A Matlab script for deconvolving the CTF in single micrographs/tomograms with a Wiener-like filter

Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography

ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.

napari: a fast, interactive, multi-dimensional image viewer for python

Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.

PyTom software for cryo-tomogram processing

STOPGAP is a MATLAB-based package for subtomogram averaging.

Self-supervised learning for isotropic cryoET reconstruction

A tool reading IMOD points, obtaining particles' info and generating .star file for RELION

Complementary tools for Relion tomo

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

Ni-NTA Affinity Grids

Software for macromolecular model-building

This folder contains the code and documentation to perform tubulin lattice subtraction.

Overcoming the preferred orientation problem in cryoEM with self-supervised deep-learning

Code for the ProteinMPNN paper

Code for running RFdiffusion

Linux running inside a PDF file via a RISC-V emulator

Image-processing software for cryo-electron microscopy

Python library that enables scripting access to CryoSPARC, a cryo-EM software package.

Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising w…

Toolkit for alphafold3 input and output files

Official implementation of AnimateDiff.

AlphaFold 3 inference pipeline.