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qiita Public
Forked from qiita-spots/qiitaQiita - A QIIME databasing effort
Python BSD 3-Clause "New" or "Revised" License UpdatedDec 23, 2025 -
biom-format Public
Forked from biocore/biom-formatThe Biological Observation Matrix (BIOM) Format Project
Python Other UpdatedDec 22, 2025 -
staged-recipes Public
Forked from conda-forge/staged-recipesA place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python BSD 3-Clause "New" or "Revised" License UpdatedFeb 14, 2025 -
rust-wfa2 Public
Forked from pairwise-alignment/rust-wfa2Rust binding for WFA2-lib
Rust MIT License UpdatedDec 29, 2024 -
scikit-bio-tutorials Public
Forked from scikit-bio/scikit-bio-tutorialsInteractive tutorials for using scikit-bio in biological research
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedJun 27, 2024 -
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mxdx Public
Generalized multiplexing / demultiplexing for FASTQ/FASTA/SAM
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duckdb-web Public
Forked from duckdb/duckdb-webDuckDB website and documentation
JavaScript MIT License UpdatedJun 4, 2024 -
scikit-bio Public
Forked from scikit-bio/scikit-bioCore objects, functions and statistics for working with biological data in Python.
Python BSD 3-Clause "New" or "Revised" License UpdatedMay 30, 2024 -
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woltka Public
Forked from qiyunzhu/woltkaWeb of Life Toolkit App
Python BSD 3-Clause "New" or "Revised" License UpdatedApr 18, 2024 -
q2-diversity-lib Public
Forked from qiime2/q2-diversity-libPython BSD 3-Clause "New" or "Revised" License UpdatedNov 16, 2023 -
unifrac Public
Forked from biocore/unifracC++ BSD 3-Clause "New" or "Revised" License UpdatedNov 14, 2023 -
q2-feature-table Public
Forked from qiime2/q2-feature-tableOfficial QIIME 2 plugin supporting normalization of sample by feature tables.
Python BSD 3-Clause "New" or "Revised" License UpdatedSep 19, 2023 -
ariadne Public
Forked from lauren-mak/ariadneAriadne, a de Bruijn graph-based program for barcoded read deconvolution
C++ Other UpdatedSep 5, 2023 -
docs Public
Forked from qiime2/docsSource repository for https://docs.qiime2.org
Python BSD 3-Clause "New" or "Revised" License UpdatedJul 27, 2023 -
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GTDBTk Public
Forked from Ecogenomics/GTDBTkGTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.
Python GNU General Public License v3.0 UpdatedJun 27, 2023 -
q2-diversity Public
Forked from qiime2/q2-diversityPython BSD 3-Clause "New" or "Revised" License UpdatedMay 26, 2023 -
qp-knight-lab-processing Public
Forked from qiita-spots/qp-knight-lab-processingPython BSD 3-Clause "New" or "Revised" License UpdatedApr 21, 2023 -
tax2tree Public
Forked from biocore/tax2treeAutomated taxonomy decoration onto a tree
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 10, 2023 -
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biom-format-feedstock Public
Forked from conda-forge/biom-format-feedstockA conda-smithy repository for biom-format.
Shell BSD 3-Clause "New" or "Revised" License UpdatedJan 18, 2023 -
apd-core Public
Forked from awesomedata/apd-coreCore repo for
Python GNU General Public License v3.0 UpdatedJan 5, 2023 -
unifrac-binaries Public
Forked from biocore/unifrac-binariesC++ BSD 3-Clause "New" or "Revised" License UpdatedNov 18, 2022 -
microsetta-private-api Public
Forked from biocore/microsetta-private-apiA private microservice to support The Microsetta Initiative
Python BSD 3-Clause "New" or "Revised" License UpdatedOct 27, 2022 -
microsetta-interface Public
Forked from biocore/microsetta-interfaceThe Microsetta participant facing user interface
Python BSD 3-Clause "New" or "Revised" License UpdatedOct 27, 2022 -
bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell UpdatedSep 28, 2022 -
markdown-cv Public
Forked from elipapa/markdown-cva simple template to write your CV in a readable markdown file and use CSS to publish/print it.
CSS MIT License UpdatedJul 21, 2022 -
unifrac-colab-notebooks Public
Forked from knightlab-analyses/unifrac-colab-notebooksNotebooks for use on Google Colabs
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedApr 1, 2022
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