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MMIP

MMIP: Microbiome Metabolome Integration Platform

Please note: We have installed MMIP on the new server, and operating system, many packages have been updated. As a result, some outcomes might differ due to changes in the seed and algorithms of these packages. Please let us know if you see high changes in results (June 15, 2024). Thank you for your patience.

Web service:

Web service for MMIP is present at: http://bioinfo.jisiasr.org/mmip/

Manual:

MMIP Manual: Details on how to get started can be found in manual: http://bioinfo.jisiasr.org/mmip/manual.php

The MMIP workflow:

This server is designed for prediction of the metabolites that could be produced by the microbial community during different health condition by using their metagenomics data (16S-rRNA). Furthermore, it also helps you to compare your real-time metabolomic (targeted or untargeted) data with predicted metabolite and helps to see what could be the most probable source of the metabolites.

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Support for MMIP:

If you have any queries, questions regarding usage, or if you would like us to include new features in MMIP, please feel free to email us at [email protected].

Publication:

  • Anupam Gautam+, Debaleena Bhowmik+, Sayantani Basu, Wenhuan Zeng, Abhishake Lahiri, Daniel H Huson, Sandip Paul*, Microbiome Metabolome Integration Platform (MMIP): a web-based platform for microbiome and metabolome data integration and feature identification, Briefings in Bioinformatics, Volume 24, Issue 6, November 2023, bbad325, https://doi.org/10.1093/bib/bbad325

  • You can access preprint here: Anupam Gautam+, Debaleena Bhowmik+, Sayantani Basu, Wenhuan Zeng, Abhishake Lahiri, Daniel H. Huson, Sandip Paul*. Microbiome Metabolome Integration Platform (MMIP): a web-based platform for microbiome and metabolome data integration and feature identification. bioRxiv, 2023; doi: https://doi.org/10.1101/2023.04.04.535534

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