A Comparative Genomics Framework Integrating Synteny Visualization

PaperBanana: Automating Academic Illustration For AI Scientists

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A comparative genomics workflow using Nextflow, conda, Julia and R

Determine horizontal transfers based on sequence similarity

A graphical user interface for omics data integrated GWAS

Pipelines and tools for the processing of ancient and modern HTS data.

The workflows utilized to run the Structural Alignment for Functional Annotation (SAFA) analysis.

A pipeline for differential expression and differential alternative splicing analysis

wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication

Gene Family Annotation Workflow

OmegaFold Release Code

Any Way to Show Multi genomic Synteny

Telomere local assembly, Improved whole genome polish, and Plastid assembly

A basic user tool to execute simple docker containers in batch or interactive systems without root privileges.

Renders a collection of sequences into a pangenome graph. https://doi.org/10.1093/bioinformatics/btae609.