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SCAT software for "Smoothed and Continuous Assignment Tests"

C++ 29 5 Updated Mar 29, 2023

Segment Anything in Medical Images

Jupyter Notebook 3,859 524 Updated May 7, 2025

《动手学深度学习》:面向中文读者、能运行、可讨论。中英文版被70多个国家的500多所大学用于教学。

Python 73,481 11,963 Updated Jul 30, 2024

A collection of tools for Hi-C data analysis

617 134 Updated Oct 3, 2025

课题组每周研讨会

HTML 197 52 Updated Apr 17, 2024

Integrate multiple genome assemblies into a pangenome graph

Python 35 7 Updated Jun 9, 2022

vessel segmentation, artery and vein, optic disc, vascular feature analysis

Python 1 Updated Sep 6, 2023

⚡ Hugo Blox: Markdown sites in minutes. Academic/resume/lab/portfolio for AI researchers & startups. Premium templates. Deploy to GitHub Pages now in 1-click 👇

HTML 9,021 2,958 Updated Oct 25, 2025

H2O LLM Studio - a framework and no-code GUI for fine-tuning LLMs. Documentation: https://docs.h2o.ai/h2o-llmstudio/

Python 4,701 499 Updated Sep 25, 2025

🆓免费的 ChatGPT 镜像网站列表,持续更新。List of free ChatGPT mirror sites, continuously updated.

Python 20,525 1,396 Updated Jun 23, 2025

Context specific and dynamic gene regulatory network reconstruction and analysis

Python 122 15 Updated Oct 8, 2025

UK Biobank 200k whole exome sequencing variant effect predictions

7 Updated Jul 27, 2022

This is the official implementation of the method ContIG, for self-supervised learning from medical imaging with genomics

Python 57 7 Updated Jul 7, 2022

VT3D: a versatile Visualization Toolbox for 3D spatial transcriptomics atlas

JavaScript 14 Updated Nov 6, 2024
Jupyter Notebook 149 34 Updated Jan 15, 2025

Continuous spatial assignment from genomics data

R 7 3 Updated Jan 20, 2020
Python 4,466 476 Updated Jul 25, 2024

Use ChatGPT (or other backends) to generate PPT automatically, all in one single file.

Go 922 90 Updated Mar 27, 2023

High-definition likelihood inference of genetic correlations (HDL)

R 123 30 Updated Jun 23, 2025
C++ 16 8 Updated Feb 12, 2023

DeepGenomeScan: A Deep Learning Approach for Whole Genome Scan (WGS) and Genome-wide Association Studies (GWAS)

R 9 2 Updated Sep 15, 2022

SpadeR provides simple R functions to compute various biodiversity indices and related (dis)similarity measures based on individual-based (abundance) data or sampling-unit-based (incidence) data ta…

R 29 10 Updated Mar 11, 2018

Code for Variable Selection in Black Box Methods with RelATive cEntrality (RATE) Measures

Jupyter Notebook 19 4 Updated Dec 2, 2020

SIGKDD'2019: DeepGBM: A Deep Learning Framework Distilled by GBDT for Online Prediction Tasks

Python 659 134 Updated Jul 25, 2024

code and data of the project "Widespread of Horizontal Gene Transfer in the Human Genome"

C 4 2 Updated Mar 13, 2017

ARG-based inference of selection using deep learning

Python 18 3 Updated Aug 31, 2023

Repo to analyze population genetic data with many different methods

R 15 8 Updated Oct 23, 2019

jekyll extensions for the blogging scholar

Gherkin 1,180 100 Updated Sep 30, 2025
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