Stars
Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data
A portal for viewing FIB-SEM datasets
Dask deployment for the Janelia Compute Cluster
Morphological snakes for image segmentation and tracking
Tools for distributed alignment of massive images
WebGL-based viewer for volumetric data
Burn is a next generation tensor library and Deep Learning Framework that doesn't compromise on flexibility, efficiency and portability.
A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.
Command-line tool for Kysely, Knex-compatible, works in Node.js, Deno, Bun, etc.
Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for training 2D and 3D models, workflows for prediction and post…
Utility for visualizing results on the fly in neuroglancer
A pilot experiment to dissminate information about Janelia's biomaging data formats.
a simple template to write your CV in a readable markdown file and use CSS to publish/print it.
A toolkit (type translators for now) that allows using your existing Supabase setup with Kysely.
🪄 Generate Kysely types directly from your Prisma schema!
💪🏻 Blazing-fast system monitoring for your desktop (built with Rust, Tauri & Svelte)
💻 A fully functional local AWS cloud stack. Develop and test your cloud & Serverless apps offline
A tool for experimentally determining the best tensorstore spec for a given machine and dataset.
Get Your Brain Together Neuroimage Registration Workshops and Hackathons