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1. Publications Publications Public

   Links to all my published peer-reviewed publications

2. gallo_skin-gut_axis gallo_skin-gut_axis Public

   Analysis repository for our manuscript: Dermal injury drives a skin-gut axis that disrupts the intestinal microbiome and intestinal immune homeostasis

   Jupyter Notebook

3. gallo_AD_peds gallo_AD_peds Public

   Jupyter Notebook 1

4. biocore/qadabra biocore/qadabra Public

   Snakemake workflow for comparison of differential abundance ranks

   Python 13 4

5. 16S_AD_South-Africa 16S_AD_South-Africa Public

   Jupyter Notebook

6. metaProtease metaProtease Public

   A pipeline for the identification of protease genes from metagenome data

   Python 1