Merge pull request #130 from yhoogstrate/dealing_incorrect_hi_tags

v0.18.3.: Dealing incorrect hi tags

Merge pull request #128 from yhoogstrate/bam_extract_strict_mode

Update to changelog readme and adds strict mode to bam-extract

sav

Merge pull request #122 from yhoogstrate/fix_fix

SA:Z:-tag fixes

mistake

Merge pull request #111 from yhoogstrate/exonic_intronic_integrate

update

Merge pull request #110 from yhoogstrate/exonic_intronic_integrate

Exonic intronic integrate

Merge pull request #109 from yhoogstrate/additional_filter_intercept

adding options specifically for FFPE data

Merge pull request #107 from yhoogstrate/additional_filter_intercept

Adds new type of filter that reduces FP ratio

Merge pull request #105 from yhoogstrate/some_blacklists

and fixed #106