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Python package for brain decoding analysis (BrainDecoderToolbox2 data format, machine learning analysis, functional MRI)

Python 41 23 Updated Oct 24, 2025

Energy Landscape Analysis Toolbox (ELAT) for MATLAB

MATLAB 29 6 Updated Nov 12, 2024

Different tools for linear regression. It contains a linear regression calculator and plotter, outlier eliminiation function, prediction margins calculator and plotter and extrapolation calculator …

MATLAB 2 Updated Nov 14, 2016

Code repository for the paper - 'Visual hallucinations in Parkinson’s disease: abnormal higher-order network interactions in the resting state through the lens of dimensionality reduction'

MATLAB 2 Updated Jul 3, 2023

Huan Liu, Hongmin Cai, Defu Yang, Wentao Zhu, Guorong Wu, and Jiazhou Chen*. “Learning Pyramidal Multi-Scale Harmonic Wavelets for Identifying the Neuropathology Propagation Patterns of Alzheimer’s…

Edge 2 1 Updated Mar 13, 2025

Developing optimal methods for theta burst prefrontal brain stimulation

MATLAB 3 Updated Feb 14, 2023

Pytorch implementation of the Graph Attention Network model by Veličković et. al (2017, https://arxiv.org/abs/1710.10903)

Python 3,107 705 Updated Jul 6, 2023

automatically create cortical flatmaps from FreeSurfer surfaces

Python 25 1 Updated Dec 23, 2025
MATLAB 5 Updated Jun 27, 2025

Assessing the universal signatures of anesthetic unconsciousness.

Jupyter Notebook 2 Updated Dec 3, 2025

Repository for paper https://authors.elsevier.com/sd/article/S1053-8119(21)00884-3

Jupyter Notebook 4 5 Updated Mar 7, 2023

Fast and parallel C implementation of TVB

Jupyter Notebook 10 8 Updated Feb 28, 2022

Official codebase for "Brain Harmony: A Multimodal Foundation Model Unifying Morphology and Function into 1D Tokens" (NeruIPS 2025).

Python 219 48 Updated Oct 26, 2025

Global amyloid burden enhances network efficiency of tau propagation in the brain

Jupyter Notebook 3 1 Updated Mar 24, 2025

matlab-special-heatmap

MATLAB 14 1 Updated May 28, 2023

In this Repo you can find a code for simulating brain signals from a mean-field model of the cortex. It includes a model of Alzheimer's disease progression in cortical structure, and some analytica…

Jupyter Notebook 1 Updated Nov 28, 2025

Scripts to obtain mind connectivity and investigate the its biological underpinnings

Jupyter Notebook 2 Updated Feb 17, 2025

PyTorch Implementation and Explanation of Graph Representation Learning papers: DeepWalk, GCN, GraphSAGE, ChebNet & GAT.

Jupyter Notebook 1,228 230 Updated Mar 28, 2025

有趣的Python爬虫和Python数据分析小项目(Some interesting Python crawlers and data analysis projects)

Jupyter Notebook 4,969 1,635 Updated Jul 6, 2021

EEG Motor Imagery Tasks Classification (by Channels) via Convolutional Neural Networks (CNNs) based on TensorFlow

Python 238 49 Updated May 20, 2024

This script generates graph embeddings for brain connectivity networks

Python 1 1 Updated Apr 1, 2021

Implementation and experiments of graph embedding algorithms.

Python 3,834 1,002 Updated Mar 14, 2024

关于脑成像模板和地图的信息汇总

35 3 Updated Apr 1, 2022

[IEEE J-BHI-2024] A Convolutional Transformer to decode mental states from Electroencephalography (EEG) for Brain-Computer Interfaces (BCI)

Python 101 12 Updated Jun 23, 2025

Simulation code for Avalanches in a Stochastic Model of Spiking Neurons

MATLAB 3 Updated Jul 24, 2015

Codes to model and analyze excitatory & inhibitory neuronal avalanches

MATLAB 1 1 Updated Oct 21, 2025

CodimNet:

Python 3 Updated Mar 19, 2025

A MATLAB implementation of Auto-Encoding Variational Bayes

MATLAB 48 23 Updated Jan 4, 2017
Jupyter Notebook 1 1 Updated Aug 16, 2024

Brain clocks and biophysical modeling in genetics models of dementia

Python 1 Updated Jan 7, 2026
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