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› Search #bioinformatics #bam #htslib #sequencing #genomics #rna #sc-atac-seq #mcc

  1. rust-htslib

    HTSlib bindings and a high level Rust API for reading and writing BAM files

    v0.51.0 5.6K #bam #bioinformatics #pileup #sequencing

  2. perbase

    Fast and correct perbase BAM/CRAM analysis

    v1.2.0 #genomics #bioinformatics #depth #coverage

  3. modtector

    A high-performance modification detection tool in Rust

    v0.9.6 #bioinformatics #detect #rna #htslib #detection

  4. bamnado

    Tools and utilities for manipulation of BAM files for unusual use cases. e.g. single cell, MCC

    v0.4.4 #bam #bioinformatics #mcc #sc-atac-seq

  5. bam

    that allows to read and write BAM, SAM and BGZIP files, written completely in Rust

    v0.1.4 200 #sam #bgzip #pileup #htslib

  6. hts-sys

    HTSlib bindings

    v2.2.0 5.9K #bam #bioinformatics #htslib #sequencing #pileup

  7. redicat

    RNA Editing Cellular Assessment Toolkit: A highly parallelized utility for analyzing RNA editing events in single-cell RNA-seq data

    v0.3.5 #rna-seq #single-cell #bioinformatics #rna-editing

  8. epimetheus-methylome

    DNA motif representation and methylation analysis, supporting IUPAC codes and Nanopore methylation data (6mA, 5mC, 4mC)

    v1.1.0 #data-analysis #motif #nanopore #methylation #iupac #dna #ml #regex #bases #reverse-complement

  9. extended-htslib

    extended HTSlib bindings and a high level Rust API for reading and writing BAM files

    v0.2.0 #bam #htslib #bioinformatics #pileup #sequencing

  10. rustynuc

    Quick analysis of pileups for likely 8-oxoG locations

    v0.3.0 #bioinformatics #8-oxo-g #pileup #oxo-g #bio

    11. Try searching with DuckDuckGo or on crates.io.

  11. mpileup

    Pile up multiple bam files site by site

    v0.0.28 #bam #site #up #read #count #pile #bed #fa #indel #user-input