The Systems Biology Format Converter (SBFC) is a Java generic framework aiming to translate any systems biology model format into another.

The SBFC Web Site providing detailed feature description and instructions for installing, using and developing new modules is: http://sbfc.sourceforge.net/ .

Currently, SBFC allows the user to convert SBML models into the formats: BioPax, Matlab, Octave, XPP, DOT, and SBGN. Due to its modular design fast development and addition of new converters is highly facilitated.

SBFC can be executed in two modes:
1. standalone executable downloading the package provided in this website;
2. web-service at http://www.ebi.ac.uk/biomodels/tools/converters .

For general discussion about SBFC, please use the forum [email protected] .

A mailing-list is also available for developers: [email protected]


Thanks for using SBFC!

The SBFC Team

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Categories

Data Formats, Simulation, Bio-Informatics

License

GNU General Public License version 2.0 (GPLv2)

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Systems Biology Format Converter Web Site

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  • lenov Posted 2011-06-01
    Many one to one converters exist in Systems Biology, most of them unmaintained. This project provides an infrastructure to collaborate on a series of reference ones.
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Additional Project Details

Intended Audience

Developers, End Users/Desktop, Science/Research

User Interface

Java Swing

Programming Language

Java

Related Categories

Java Data Formats Software, Java Simulation Software, Java Bio-Informatics Software

Registered

2010-10-07
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