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1. PyEMMA PyEMMA Public archive

   🚂 Python API for Emma's Markov Model Algorithms 🚂

   Python 330 125

2. pyemma_tutorials pyemma_tutorials Public

   How to analyze molecular dynamics data with PyEMMA

   Jupyter Notebook 80 34

3. molPX molPX Public

   IPython API to visualize MD-trajectories along projected trajectories inside a Jupyter notebook

   Python 43 3

4. msmtools msmtools Public

   Tools for estimating and analyzing Markov state models

   Python 43 27

5. thermotools thermotools Public

   Winter is coming...

   Python 13 5

6. deeptime deeptime Public

   Deep learning meets molecular dynamics.

   Jupyter Notebook 187 42