Package: SanityR
Type: Package
Title: R/Bioconductor interface to the Sanity model gene expression analysis
Version: 0.99.3
Authors@R: c(
    person("Teo", "Sakel", 
           email = "[email protected]", 
           role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-9946-9498")),
    person("MCIU/AEI", 
           role = c("fnd"),
           comment = c(ROR = "05r0vyz12", DOI = "10.13039/501100011033"))
  )
Description: a Bayesian normalization procedure derived from first principles. 
    Sanity estimates expression values and associated error bars directly from 
    raw unique molecular identifier (UMI) counts without any tunable parameters.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
biocViews: Software, GeneExpression, SingleCell, Normalization, Bayesian
BiocType: Software
URL: https://github.com/TeoSakel/SanityR
BugReports: https://github.com/TeoSakel/SanityR/issues
Imports: 
    Rcpp,
    BiocGenerics,
    BiocParallel,
    MatrixGenerics,
    methods,
    S4Vectors,
    scuttle,
    SingleCellExperiment,
    SummarizedExperiment
LinkingTo: Rcpp
RoxygenNote: 7.3.2
Roxygen: list(markdown = TRUE)
Suggests: 
    BiocStyle,
    knitr,
    rmarkdown,
    testthat (>= 3.0.0),
    scater,
    Rtsne
Config/testthat/edition: 3
VignetteBuilder: knitr