Developability

unzip sequence to assay score pickle file (to fit on github)

#This version has seq to assay info for sequences that have all 10 assay scores but not yield

unzip ./datasets/seq_to_assay_train_all10.zip

Name		Name	Last commit message	Last commit date
Latest commit History 27 Commits
datasets		datasets
figures		figures
model_stats		model_stats
models		models
plotpairs		plotpairs
trials		trials
.gitignore		.gitignore
README.md		README.md
Untitled.ipynb		Untitled.ipynb
assay_to_yield_best_arch.png		assay_to_yield_best_arch.png
aty_best_arch_cv.csv		aty_best_arch_cv.csv
blac_forest_cutoffs.png		blac_forest_cutoffs.png
get_best_aty_assays.py		get_best_aty_assays.py
get_devrep_predictions.py		get_devrep_predictions.py
gfp_forest_cutoffs.png		gfp_forest_cutoffs.png
load_format_data.py		load_format_data.py
main.py		main.py
main_assay_to_seq.py		main_assay_to_seq.py
main_assay_to_yield.py		main_assay_to_yield.py
main_final_models.py		main_final_models.py
main_seq_to_assay.py		main_seq_to_assay.py
main_seq_to_pred_yield.py		main_seq_to_pred_yield.py
main_seqandassay.py		main_seqandassay.py
model_architectures.py		model_architectures.py
model_comparisons.py		model_comparisons.py
model_module.py		model_module.py
pbs_main_CPU.pbs		pbs_main_CPU.pbs
pbs_main_GPU.pbs		pbs_main_GPU.pbs
plot_model.py		plot_model.py
plot_rf_trees.py		plot_rf_trees.py
seq_to_yield_simple.png		seq_to_yield_simple.png
sort_forest_cutoffs.png		sort_forest_cutoffs.png
submodels_module.py		submodels_module.py
test.png		test.png

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