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Add PySR integration test #461

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7db1bfd
Add PySR integration test
MilesCranmer Feb 12, 2024
5f5d3f4
Add missing virtualenv install
MilesCranmer Feb 12, 2024
977296d
Use correct python executable for virtualenv
MilesCranmer Feb 12, 2024
ee55517
Merge branch 'main' into pysr-integration-test
MilesCranmer Aug 23, 2024
c0dcd73
test: move pysr test to integration folder
MilesCranmer Aug 23, 2024
cd61077
ci: run integration tests separately
MilesCranmer Aug 23, 2024
bb793b3
ci: skip code coverage for integration tests
MilesCranmer Aug 23, 2024
b279127
ci: improve naming scheme of CI
MilesCranmer Aug 23, 2024
b5749e1
test: fix naming scheme
MilesCranmer Aug 23, 2024
a7cf381
ci: improve naming scheme of CI
MilesCranmer Aug 23, 2024
3391801
test: ensure we can see the integration test output
MilesCranmer Aug 23, 2024
96bfd1d
Revert "test: ensure we can see the integration test output"
MilesCranmer Aug 23, 2024
3504ec6
test: simplify pysr integration test
MilesCranmer Aug 23, 2024
c271a97
ci: make conditional compatible with windows
MilesCranmer Aug 23, 2024
4e3df8b
ci: time test
MilesCranmer Aug 23, 2024
fa272c6
test: save to temp file
MilesCranmer Aug 23, 2024
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test: move pysr test to integration folder
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@MilesCranmer
MilesCranmer committed Aug 23, 2024
commit c0dcd736467a497a2f083b0a7bb96c0c84f3306e
45 changes: 45 additions & 0 deletions pytest/integration/pysr.py
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Original file line number Diff line number Diff line change
@@ -0,0 +1,45 @@
def test_integration_pysr():
"Integration tests for PySR"
import os
import platform
import subprocess
import sys
import tempfile

with tempfile.TemporaryDirectory() as tempdir:
subprocess.run([sys.executable, "-m", "virtualenv", tempdir], check=True)

virtualenv_path = os.path.join(
tempdir, "Scripts" if platform.system() == "Windows" else "bin"
)
virtualenv_executable = os.path.join(virtualenv_path, "python")

assert os.path.exists(virtualenv_executable)

# Install this package
subprocess.run([virtualenv_executable, "-m", "pip", "install", "."], check=True)
# Install PySR with no requirement on JuliaCall
subprocess.run(
[virtualenv_executable, "-m", "pip", "install", "--no-deps", "pysr"],
check=True,
)
# Install PySR test requirements
subprocess.run(
[
virtualenv_executable,
"-m",
"pip",
"install",
"sympy",
"pandas",
"scikit_learn",
"click",
"setuptools",
"pytest",
],
check=True,
)
# Run PySR main test suite
subprocess.run(
[virtualenv_executable, "-m", "pysr", "test", "main"], check=True
)
49 changes: 0 additions & 49 deletions pytest/test_all.py
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Original file line number Diff line number Diff line change
Expand Up @@ -164,52 +164,3 @@ def test_call_nogil(yld, raw):
t2 = time() - t0
# executing the tasks should take about 1 second because they happen in parallel
assert 0.9 < t2 < 1.5


def test_integration_pysr():
"Integration tests for PySR"
import os
import platform
import subprocess
import sys
import tempfile

with tempfile.TemporaryDirectory() as tempdir:
subprocess.run([sys.executable, "-m", "virtualenv", tempdir], check=True)

virtualenv_path = os.path.join(
tempdir, "Scripts" if platform.system() == "Windows" else "bin"
)
virtualenv_executable = os.path.join(virtualenv_path, "python")

assert os.path.exists(virtualenv_executable)

# Install this package
subprocess.run([virtualenv_executable, "-m", "pip", "install", "."], check=True)
# Install PySR with no requirement on JuliaCall
subprocess.run(
[virtualenv_executable, "-m", "pip", "install", "--no-deps", "pysr"],
check=True,
)
# Install PySR test requirements
subprocess.run(
[
virtualenv_executable,
"-m",
"pip",
"install",
"sympy",
"pandas",
"scikit_learn",
"click",
"setuptools",
"typing_extensions",
"pytest",
"nbval",
],
check=True,
)
# Run PySR main test suite
subprocess.run(
[virtualenv_executable, "-m", "pysr", "test", "main"], check=True
)