MobiDL

Apptainer recipes for bioinformatics tools

WDL workflow for short-read variant calling using DeepVariant

This repo contains some dataset for bioinformatics workflow testing and qualification

WDL workflow for short-read alignment in panel sequencing

A collection of tasks wrapped in WDL

Backends configuration files

This workflow do VariantCalling on Oxford Nanopore Technologies data.

This workflow do VariantCalling on Illumina RNA sequencing data following GATK best Practices.