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Merge Dev to Main for Initial Data Product Share with Sponsor#49

Merged

shaunhutch merged 215 commits intomainfrom

Jun 21, 2023

Commits on May 26, 2023

feat: added entity label file loading function
tieandrews
committed

Commits on May 30, 2023

Commits on Jun 1, 2023

Commits on Jun 2, 2023

Commits on Jun 6, 2023

Commits on Jun 7, 2023

Commits on Jun 10, 2023

Updated to new format of input json
shaunhutch
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Commits on Jun 12, 2023

Commits on Jun 13, 2023

Commits on Jun 14, 2023

Commits on Jun 15, 2023

Commits on Jun 19, 2023

bug: added control for when mlflow diasbled
tieandrews
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parquet single run set up
kellywujy
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Code clean up
brabbit61
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Docker setup for data review tool
brabbit61
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Merge branch 'data-review-tool-shaun' into data-review-tool-jenit
brabbit61
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Fixed paths
shaunhutch
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updated href
shaunhutch
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Merge branch 'data-review-tool-shaun' of github.com:NeotomaDB/MetaExtractor into data-review-tool-shaun
shaunhutch
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Updated href round 2
shaunhutch
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Add readme for setting up docker
brabbit61
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feat: initial NER pipeline framework

tieandrews
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brabbit61
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docs: minor reformatting

tieandrews
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brabbit61
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feat: initial data loading functions complete

tieandrews
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brabbit61
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feat: initial commit on functioning pipeline

tieandrews
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brabbit61
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docs: rename of file

tieandrews
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brabbit61
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feat: initial commit for hf extraction module

tieandrews
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brabbit61
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docs: minor import cleanup

tieandrews
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brabbit61
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tests: initial tests commit

tieandrews
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brabbit61
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tests: sample gdd data for testing

tieandrews
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brabbit61
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feat: updated log message format

tieandrews
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brabbit61
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feat: added max_articles argument for testing

tieandrews
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brabbit61
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feat: initial spacy integration with pipeline

tieandrews
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bug: spacy model load not working

tieandrews
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brabbit61
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feat: added log file output and location definitin

tieandrews
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brabbit61
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docs: initial dockerignore file

tieandrews
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brabbit61
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bug: remove nltk stopwords download in script

tieandrews
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brabbit61
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feat: added env variable model selection

tieandrews
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brabbit61
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feat: initial functioning docker image

tieandrews
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brabbit61
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feat: docker compose for entity entity extraction

tieandrews
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brabbit61
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docs: added comments

tieandrews
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brabbit61
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feat: initial entity extraction dockerfile

tieandrews
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brabbit61
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feat: initial docker-compose file commit

tieandrews
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brabbit61
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docs: entity-extraction pipeline README

tieandrews
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brabbit61
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feat: made pipeline run with folder of files

tieandrews
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brabbit61
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bug: incorrect reference to df

tieandrews
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brabbit61
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bug: added dotenv to requirements

tieandrews
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brabbit61
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bug: tries to load model even if it's not there

tieandrews
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brabbit61
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bug: added pytorch and transformers

tieandrews
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brabbit61
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bug: stopwords error, made download quiet

tieandrews
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brabbit61
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bug: load journal articles incorrect replace

tieandrews
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brabbit61
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feat: added non-root accessible file paths

tieandrews
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brabbit61
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feat: created non-root user permissions

tieandrews
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brabbit61
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docs: added docker run sample details

tieandrews
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brabbit61
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bug: removed nltk download call

tieandrews
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brabbit61
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bug: move stopwords download inside function

tieandrews
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brabbit61
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Docker setup for data review tool
brabbit61
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Add readme for setting up docker
brabbit61
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bug fix
brabbit61
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Merge branch 'dev' into data-review-tool-shaun
brabbit61
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Merge pull request #43 from NeotomaDB/data-review-tool-shaun
brabbit61
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feat: updated preprocessing stride length
tieandrews
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feat: updated grouped_entities to aggregationstrat
tieandrews
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feat: baseline test results
tieandrews
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docs: roberta finetune v3 results
tieandrews
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Commits on Jun 21, 2023