Added Bayes benchmark script #105
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DrPaulSharp
reviewed
Dec 18, 2024
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@DrPaulSharp they both run fine for me, but I may have something weird going on with my binary. what kind of error were you getting? |
DrPaulSharp
reviewed
Jan 13, 2025
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@DrPaulSharp can confirm everything works as expected now |
DrPaulSharp
approved these changes
Jan 14, 2025
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This PR fixes part of #92 by adding the Bayes benchmark script, which calculates the posterior distributions for a two- and three-dimensional example 'from scratch' and compares them to the distributions generated by the nested sampler and DREAM.
The Python script is mostly similar in workflow to the MATLAB one, but the direct calculation of the posterior is vectorised and the module/function docstrings go into a little more detail on what is actually being done, for users who may not be familiar with the basics of Bayesian reflectivity analysis.
This PR also fixes a minor issue with the plotting library - the axes on the contour plots were the wrong way around (but then were flipped to be correct on corner plots)!