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SeviJordi/README.md

πŸ’« About Me:

Hi there! πŸ‘‹ I’m a biologist and bioinformatician exploring the world of infectious disease genomics 🧬. I’ve worked on Klebsiella pneumoniae, tracking antimicrobial resistance and using AI to predict resistance patterns πŸ€–πŸ¦ . I also studied the within-host evolution of SARS-CoV-2 during the pandemic 🧫. Currently, I’m based at Institut Pasteur, where I use Bayesian phylodynamics to understand how superspreading shapes the transmission of sexually transmitted infections πŸ“ŠπŸ“. Passionate about pathogens, data, and turning genomes into insights! πŸš€

🌐 Socials:

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πŸ’» Tech Stack:

R Julia Python Bash Script Markdown Anaconda MariaDB NumPy Pandas Plotly scikit-learn Matplotlib Keras Git GitHub Notion

πŸ“Š GitHub Stats:



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  1. PathoGenOmics-Lab/VIPERA PathoGenOmics-Lab/VIPERA Public

    A Snakemake workflow for SARS-CoV-2 Viral Intra-Patient Evolution Reporting and Analysis

    Python 8

  2. WGS_to_AMR WGS_to_AMR Public

    Improved prediction of AMR in Klebsiella pneumoniae using machine learning

    Shell 1 1