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Commits on Sep 9, 2025

• Merge pull request #15 from cfe-lab/ReformatBBLabAlleles

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• Merge branch 'main' into ReformatBBLabAlleles

  

  Richard Liang

  committed
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• Incorporated David's suggestion that allows us to eliminate the shim for os.path.join.

  

  Richard Liang

  committed
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• Merge pull request #14 from cfe-lab/ReformatBBLabAlleles

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  rhliang

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• Merge branch 'main' into ReformatBBLabAlleles

  

  Richard Liang

  committed
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• Tweaked our yamllint config.

  

  Richard Liang

  committed
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• Merge pull request #13 from cfe-lab/ReformatBBLabAlleles

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  rhliang

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• Some final tweaks before creating a v1.0.0 release.

  

  Richard Liang

  committed
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Commits on Sep 4, 2025

• Converted the old BBLab alleles to the new format.

  

  Richard Liang

  committed
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Commits on Aug 28, 2025

• Merge pull request #12 from cfe-lab/FoldClinicalIn

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  rhliang

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• Fixed up a docstring's formatting.

  

  Richard Liang

  committed
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• Fixed a mis-identified precondition that doesn't always hold.

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  Richard Liang

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• Merge pull request #10 from cfe-lab/FoldClinicalIn

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  rhliang

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• Closes #11.

  

  Richard Liang

  committed
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• Some refactoring of code and adding a few tests (incomplete).

  

  rhliang

  committed
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Commits on Aug 27, 2025

• Fixed failing tests, but coverage has dipped and we need to test the new functionality still.

  

  rhliang

  committed
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• WIP: implemented a new algorithm to get the "clean alleles" string.

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  rhliang

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Commits on Aug 26, 2025

• Minor change to the docstring for AllelePairs.is_homozygous.

  

  Richard Liang

  committed
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Commits on Aug 25, 2025

• Closes #9.

  

  Richard Liang

  committed
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Commits on Aug 14, 2025

• Merge pull request #8 from cfe-lab/FoldClinicalIn

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  rhliang

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• Cleaned up some mypy/ruff complaints.

  

  rhliang

  committed
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• Merge pull request #7 from cfe-lab/FoldClinicalIn

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  rhliang

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• Tidied up some yaml.

  

  rhliang

  committed
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• Merge branch 'main' into FoldClinicalIn

  

  rhliang

  committed
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• Tweaking the "build_and_publish_gem" action.

  

  rhliang

  committed
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Commits on Aug 13, 2025

• Merge pull request #6 from cfe-lab/FoldClinicalIn

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  rhliang

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• Some work on fixing the tests under older Python versions.

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  rhliang

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• Fixed some tests broken by the last commit.

  

  Richard Liang

  committed
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Commits on Aug 12, 2025

• Hammered out some details on the Ruby wrapper.

  

  Richard Liang

  committed
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• HLAResult now contains the "alleles version" and information about all possible matches.

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  Richard Liang

  committed
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• Merge branch 'main' into FoldClinicalIn

  

  Richard Liang

  committed
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• Added "alleles version" information to the output of interpret_from_json.py.

  

  Richard Liang

  committed
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Commits on Aug 11, 2025

• Merge pull request #5 from cfe-lab/FoldClinicalIn

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  rhliang

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• Removed the bblab code (it now lives in the bblab_hla_typing_tool repo).

  

  Richard Liang

  committed
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• Replaced the action-junit-report action with test-results-action.

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  Richard Liang

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