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"Best common allele pair" can miss possibilities where one of the best common alleles is in different positions of the pairs #11

@rhliang

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@rhliang

Noticed this while doing round 1 of Thunderdome. We can run into situations where the "best common allele pair" is reported sub-optimally. For example, if you see alleles

  • B*57:01:01 - B*57:02:03
  • B*57:02:04 - B*57:03

then the reported "best common allele pair" is B*57 - B*57, which isn't wrong, but the best possible result here is B*57 - B*57:02.

Update the algorithm for identifying this pair to catch these situations.

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