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1. run-sj2psi run-sj2psi Public

   runs https://github.com/olgabot/sj2psi across a set of samples; outputs .csv file

   Python

2. tgen/ppmi-qc-wt-paper tgen/ppmi-qc-wt-paper Public

   QC of whole blood whole transcriptome for PPMI

   R 4 2

3. NCBI-Codeathons/airbending_isoseq NCBI-Codeathons/airbending_isoseq Public

   Python 3 2

4. tgen/tau-tissue-specificity tgen/tau-tissue-specificity Public

   calculates tau tissue specificity scores from gtex data

   R 1

5. NIH-CARD/IsoMEX NIH-CARD/IsoMEX Public

   IsoMEX: Convert Iso-Seq single cell outputs to standardized 10x/CellRanger MEX format for multi-sample analysis

   Python

6. tgen/gencode-plus-lncipedia tgen/gencode-plus-lncipedia Public

   non-redundant genome annotation combining GENCODE 40 and lncipedia 5.2

   R