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[WIP] Add MTZ kinetics cookbook - #7119

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buchanankerswell wants to merge 3 commits into
geodynamics:mainfrom
buchanankerswell:cookbook-mtz-kinetics
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[WIP] Add MTZ kinetics cookbook#7119
buchanankerswell wants to merge 3 commits into
geodynamics:mainfrom
buchanankerswell:cookbook-mtz-kinetics

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@buchanankerswell

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Pull Request Checklist. Please read and check each box with an X. Delete any part not applicable. Ask on the forum if you need help with any step.

Describe what you did in this PR and why you did it.

Before your first pull request:

For all pull requests:

For new features/models or changes of existing features:

  • I have tested my new feature locally to ensure it is correct.
  • I have created a testcase for the new feature/benchmark in the tests/ directory.
  • I have added a changelog entry in the doc/modules/changes directory that will inform other users of my change.

Summary

This cookbook is an improved version of the phase_transition_kinetics cookbook. It introduces the new reaction kinetic framework developed in #7094, but doesn't cover any new concepts. I would argue that it should replace the phase_transition_kinetics cookbook.

@buchanankerswell

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I've opened this and realized that I forgot the testing step. I will update the PR and tag someone for a review then.

@buchanankerswell
buchanankerswell force-pushed the cookbook-mtz-kinetics branch 3 times, most recently from 6e17e3a to 0fdc486 Compare July 25, 2026 12:34
@buchanankerswell buchanankerswell changed the title [WIP] Add MTZ kinetics cookbook Add MTZ kinetics cookbook Jul 25, 2026
@buchanankerswell

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@gassmoeller and @bobmyhill, this is ready for a review. Much of the suggested documentation improvements provided by @bobmyhill in #7094 should be incorporated into this cookbook. Otherwise, I'd appreciate any general feedback.

I'd also like to get your take on renaming cookbooks/mtz_kinetics --> cookbooks/phase_transition_kinetics to replace what I wrote last year with this updated and improved version.

@buchanankerswell
buchanankerswell force-pushed the cookbook-mtz-kinetics branch 2 times, most recently from 0d351db to 290ba52 Compare July 28, 2026 15:46
@buchanankerswell

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@gassmoeller and @bobmyhill, this is ready for a read. It is consistent with the current #7094.

It fails checks because #7094 is not yet merged (files not found). I've tested this locally and it passes.

@buchanankerswell
buchanankerswell force-pushed the cookbook-mtz-kinetics branch 6 times, most recently from 50d1f13 to 97a037d Compare July 30, 2026 14:10
@buchanankerswell buchanankerswell changed the title Add MTZ kinetics cookbook [WIP] Add MTZ kinetics cookbook Jul 30, 2026
@buchanankerswell
buchanankerswell force-pushed the cookbook-mtz-kinetics branch 2 times, most recently from cbd6b4b to 75758f0 Compare August 6, 2026 11:42
@buchanankerswell
buchanankerswell force-pushed the cookbook-mtz-kinetics branch 2 times, most recently from 8b407fe to ac3e45c Compare August 8, 2026 23:58
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