Thanks to visit codestin.com
Credit goes to github.com

Skip to content
@hubmapconsortium

HuBMAP Consortium

This is the GitHub organization for repos related to the work of the HuBMAP Consortium.

Pinned Loading

  1. entity-api entity-api Public

    A set of web service calls to return information about HuBMAP entities

    Python 3 1

  2. gateway gateway Public

    Custom gateway service with auth check for APIs and file assets not hosted with AWS API Gateway

    Python 1

  3. search-api search-api Public

    HuBMAP search service and associated pieces to create an index

    Python 2 2

  4. portal-ui portal-ui Public

    HuBMAP Data Portal front end

    TypeScript 13 3

  5. ingest-ui ingest-ui Public

    HuBMAP Data Ingest Portal

    JavaScript 4

  6. ingest-pipeline ingest-pipeline Public

    Data ingest pipeline(s) for QA/metadata etl/post-processing

    Python 4 6

Repositories

Showing 10 of 191 repositories
  • ingest-ui Public

    HuBMAP Data Ingest Portal

    hubmapconsortium/ingest-ui’s past year of commit activity
    JavaScript 4 MIT 0 65 (1 issue needs help) 6 Updated Mar 3, 2026
  • hra-ui Public

    HRA UIs Monorepo (includes HRA Portal, EUI, RUI, ASCT+B Reporter, and more)

    hubmapconsortium/hra-ui’s past year of commit activity
    TypeScript 6 MIT 4 113 6 Updated Mar 2, 2026
  • hra-registrations Public

    Manually curated HRA Dataset Graphs

    hubmapconsortium/hra-registrations’s past year of commit activity
    HTML 1 MIT 0 16 0 Updated Mar 2, 2026
  • ingest-validation-tools Public

    HuBMAP data submission guidelines, and tools which check that submissions adhere to those guidelines.

    hubmapconsortium/ingest-validation-tools’s past year of commit activity
    Python 9 MIT 18 39 7 Updated Mar 2, 2026
  • portal-ui Public

    HuBMAP Data Portal front end

    hubmapconsortium/portal-ui’s past year of commit activity
    TypeScript 13 MIT 3 175 12 Updated Mar 2, 2026
  • ccf-grlc Public

    ccf-grlc: Useful SPARQL queries for HRA work + API via grlc.io

    hubmapconsortium/ccf-grlc’s past year of commit activity
    JavaScript 1 MIT 1 3 0 Updated Mar 2, 2026
  • ingest-pipeline Public

    Data ingest pipeline(s) for QA/metadata etl/post-processing

    hubmapconsortium/ingest-pipeline’s past year of commit activity
    Python 4 MIT 6 79 7 Updated Mar 2, 2026
  • pas-ftu-segmentation-pipeline Public
    hubmapconsortium/pas-ftu-segmentation-pipeline’s past year of commit activity
    Python 0 MIT 0 3 1 Updated Mar 2, 2026
  • reharmonize-legacy-metadata Public

    Resources and outputs for aligning legacy metadata with new schema standards through mappings, patches and glossaries

    hubmapconsortium/reharmonize-legacy-metadata’s past year of commit activity
    HTML 1 1 0 0 Updated Mar 2, 2026
  • stellar Public
    hubmapconsortium/stellar’s past year of commit activity
    Jupyter Notebook 0 0 1 0 Updated Mar 2, 2026
View all repositories

Top languages

Loading…

Most used topics

Loading…