Example labscript and analysis scripts for IMAQdxCamera and RemoteBLACS #55
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Note: The connection table is not compatible with that in #54, so to use this one would need to change the [paths]
connection_table_py = %(labscriptlib)s\connection_table_IMAQdx_remote.pyI'm open to modifying the example connection table in #54 to be a superset of example devices, but I don't think this will scale to all examples, and it detracts from the minimalism of the example. |
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Happy to merge, russ? |
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Yes, subject to your endorsement of the choice to not make the base example connection_table.py (#54) be a superset which includes this example's connection table. |
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Yeah, individual simple examples rather than a kitchen-sink approach seems sensible to me. Thanks for this! |
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commit d8b8343 Merge: 9bc7a39 bfa6932 Author: Chris Billington <[email protected]> Date: Wed Jun 24 20:48:39 2020 -0400 Merge pull request #59 from philipstarkey/fix-h5py-file-mode Addresses #47 for this module commit 9bc7a39 Merge: 1189334 66d0be4 Author: Chris Billington <[email protected]> Date: Wed Jun 24 20:30:42 2020 -0400 Merge pull request #55 from rpanderson/example_IMAQdx_remote Example labscript and analysis scripts for IMAQdxCamera and RemoteBLACS commit bfa6932 Author: philipstarkey <[email protected]> Date: Thu Jun 25 10:25:49 2020 +1000 Addresses #47 for this module commit 1189334 Merge: 5025b1b 0b0d07a Author: Chris Billington <[email protected]> Date: Wed Jun 24 19:35:15 2020 -0400 Merge pull request #54 from rpanderson/example_experiment Minimal working connection table and example experiment script commit 66d0be4 Author: Russell Anderson <[email protected]> Date: Mon Jun 15 13:37:23 2020 +1000 lyse analysis script demonstrating some Run methods for example_IMAQdx_remote commit a48a9c0 Author: Russell Anderson <[email protected]> Date: Mon Jun 15 13:15:48 2020 +1000 Example connection table and labscript experiment script for RemoteBLACS and IMAQdxCamera commit 5025b1b Merge: f77525f ed76901 Author: Chris Billington <[email protected]> Date: Wed Jun 24 02:16:29 2020 -0400 Merge pull request #58 from philipstarkey/philipstarkey/issue43 Fixes .pth file has no effect in editable install commit ed76901 Author: chrisjbillington <[email protected]> Date: Wed Jun 24 01:23:44 2020 -0400 Move copying of .pth file into setup.py Use a custom develop command to copy the .pth file into site-packages when `python setup.py develop` is run - this is what pip does under the hood for `pip install -e`. No longer need desktop-app to locate site-packages, as the setuptools command class knows it as `self.install_dir`. The file is not removed by `pip uninstall`, but due to the `try: except:`s in the `.pth` file, leaving it behind is harmless. It is removed if the user runs whatever `setup.py` command undoies commit 894e245 Author: chrisjbillington <[email protected]> Date: Wed Jun 24 00:04:13 2020 -0400 Require desktop-app 0.2.6 Which renames `_get_install_directory` to not have an underscore, and which fixes a bug preventing docs from building on RTD. commit 271439e Author: philipstarkey <[email protected]> Date: Wed Jun 24 12:53:49 2020 +1000 Removed support for custom development directories from path commit dd098a5 Author: philipstarkey <[email protected]> Date: Wed Jun 24 12:38:19 2020 +1000 Fixes .pth file has no effect in editable install Fixes #43 The .pth file is now copied during `labscript-profile-create` if it does not exist in the site-packages dir (where the .egg-info files exist) and if it the .pth file exists in the package structure (aka labscript-utils it is an editable install) The labscript-suite.pth file has been updated to not raise an exception if labscript-suite has been uninstalled (so we do not have to worry about cleanup). Also updated the `labscript_profile.add_userlib_and_pythonlib` function to use the `site` library for adding userlib and pythonlib to the system path. commit 0b0d07a Author: Russell Anderson <[email protected]> Date: Mon Jun 22 17:48:00 2020 +1000 start()/stop() in __main__ block so connection table can be imported commit 4c19de9 Author: Russell Anderson <[email protected]> Date: Mon Jun 15 13:12:52 2020 +1000 Add AnalogOut with ramp example, rename DigitalOut connection commit 9b64a0d Author: Russell Anderson <[email protected]> Date: Wed Jun 10 23:09:03 2020 +1000 Minimal example connection table and labscript using dummy devices commit f77525f Author: Phil Starkey <[email protected]> Date: Sat Jun 20 18:09:53 2020 +1000 Removed unnecessary fixed title from main TOC This was erroneously added in #57 commit 5e02b01 Merge: 3f78207 8b19766 Author: Phil Starkey <[email protected]> Date: Sat Jun 20 18:07:04 2020 +1000 Merge pull request #57 from philipstarkey/master Changed URL for API reference to be shorter Fixed bug with readthedocs auto PR build commit 8b19766 Author: philipstarkey <[email protected]> Date: Sat Jun 20 12:02:51 2020 +1000 Updated method call for stylesheet to remove deprecated warning in build commit 56fdd63 Author: philipstarkey <[email protected]> Date: Sat Jun 20 11:46:33 2020 +1000 Fixed sphinx conf to detect PR builds and link to 'latest' instead of stable commit 9889d19 Author: philipstarkey <[email protected]> Date: Sat Jun 20 10:44:04 2020 +1000 Changed URL for API reference to be shorter commit 3f78207 Merge: bbd928a bf9d10e Author: Phil Starkey <[email protected]> Date: Fri Jun 19 18:58:37 2020 +1000 Merge pull request #56 from philipstarkey/master Added links to other component docs commit bf9d10e Author: philipstarkey <[email protected]> Date: Fri Jun 19 16:06:09 2020 +1000 Addressing latest review comments commit e75b6bc Author: philipstarkey <[email protected]> Date: Fri Jun 19 11:23:49 2020 +1000 Updated docs to use jinja template for component doc links commit 9c61238 Author: philipstarkey <[email protected]> Date: Thu Jun 18 17:14:57 2020 +1000 Removed autogenerated rst file from version control commit 2303185 Author: philipstarkey <[email protected]> Date: Thu Jun 18 16:43:29 2020 +1000 Updated .gitignore with latest GitHub defaults commit 87b757e Author: philipstarkey <[email protected]> Date: Thu Jun 18 16:39:52 2020 +1000 Relocated custom sphinx gitignore rules commit 75813a5 Author: philipstarkey <[email protected]> Date: Thu Jun 18 16:31:01 2020 +1000 Updated PR as per review in labscript-suite/labscript-suite#48 commit bbd928a Author: Russell Anderson <[email protected]> Date: Wed Jun 17 11:39:17 2020 +1000 Populated README.md with styling, iconogrpahy, prose, and badges commit 573c521 Author: philipstarkey <[email protected]> Date: Tue Jun 16 18:10:25 2020 +1000 Added links to other component docs
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This example builds upon testing/test.py in
labscript_devices.IMAQdxCamera, and illustrates basic usage of theIMAQdxCameralabscript device andRemoteBLACS. Included are a connection table and labscript experiment script (in userlib/labscriptlib/example_apparatus), and a lyse analysis script (in userlib/analysislib/example_apparatus).Usage of the following methods of
lyse.Runare demonstrated:get_globals(),get_images(),save_result(), as well aslyse.spinning_top,lyse.path, andlyse.data().runmanager settings
The labscript experiment script example_IMAQdx_remote.py is loaded into runmanager:
blacs display
The IMAQdxCamera in
mockmode displays the synthetic data after each shot:RemoteBLACSserverThe
RemoteBLACSserver (started usingpython -m labscript_utils.remote) shown in a separate terminal:lyse singleshot routines dialog
The single-shot analysis routine example_IMAQdx_remote.py is loaded into lyse:
Example analysis output
A 1D plot generated from lineouts of the synthetic image data is displayed:
The plot updates automatically when new shots are added to the lyse analysis queue by blacs.