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Check this issue by the following code. The lines in the plot should be the same.
import numpy as np import matplotlib.pyplot as plt data = np.arange(1000) a = np.empty((1000, 2)) b = np.empty((2, 1000)) plt.figure() a[:, 0] = data plt.psd(a[:, 0]) b[0, :] = data plt.psd(b[0, :]) plt.show()