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Plotting with markeredgecolor="none" causes markers to not display (probably fully transparent) in current master 1.5.x. It might be related to this pull request. The plot in Out[3] below does not show anything. In matplotlib 1.4 it displays markers as expected.
~/matplotlib (master)$ ipython
Python 2.7.6 (default, Aug 25 2014, 18:32:19)
Type "copyright", "credits" or "license" for more information.
IPython 2.2.0 -- An enhanced Interactive Python.
? -> Introduction and overview of IPython's features.
%quickref -> Quick reference.
help -> Python's own help system.
object? -> Details about 'object', use 'object??' for extra details.
In [1]: %matplotlib
Using matplotlib backend: TkAgg
In [2]: import matplotlib; import matplotlib.pyplot as plt; import numpy as np
In [3]: plt.plot(np.arange(3), 'ro', mec='none')
Out[3]: [<matplotlib.lines.Line2D at 0x4171610>]
In [4]: matplotlib
Out[4]: <module 'matplotlib' from '/apps/stonefs1/azhu/venv/el5-stonelib/lib/python2.7/site-packages/matplotlib-1.5.x-py2.7-linux-x86_64.egg/matplotlib/__init__.pyc'>
In [5]: matplotlib.__version__
Out[5]: '1.5.x'Metadata
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