Closed
Description
I am doing data processing and generating many plots with many scripts running in parallel. The scripts use texmanager, and many fail when drawing to png
due to below. My plots are large, with many subplots, and the filesystem I'm writing to is slow. Therefore, the hardcoded limit of 50 tries with 0.1 second waits is not appropriate.
Those hardcoded values should be configurable so that the user can change them if needed.
Traceback (most recent call last):
File "/home/users/gholl/venv/stable-3.5/bin/plot_hirs_field_timeseries", line 11, in <module>
load_entry_point('FCDR-HIRS==0.0.4', 'console_scripts', 'plot_hirs_field_timeseries')()
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/FCDR_HIRS/analysis/timeseries.py", line 1225, in main
"calibpos": p.corr_calibpos})
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/FCDR_HIRS/analysis/timeseries.py", line 592, in plot_noise_with_other
alltemp='_'.join(temperatures), tb=t[0], te=t[-1]))
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/pyatmlab/graphics.py", line 208, in print_or_show
fig.canvas.print_figure(str(outf))
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/backend_bases.py", line 2192, in print_figure
**kwargs)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/backends/backend_agg.py", line 545, in print_png
FigureCanvasAgg.draw(self)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/backends/backend_agg.py", line 464, in draw
self.figure.draw(self.renderer)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/artist.py", line 63, in draw_wrapper
draw(artist, renderer, *args, **kwargs)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/figure.py", line 1142, in draw
renderer, self, dsu, self.suppressComposite)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/image.py", line 139, in _draw_list_compositing_images
a.draw(renderer)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/artist.py", line 63, in draw_wrapper
draw(artist, renderer, *args, **kwargs)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/axes/_base.py", line 2405, in draw
mimage._draw_list_compositing_images(renderer, self, dsu)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/image.py", line 139, in _draw_list_compositing_images
a.draw(renderer)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/artist.py", line 63, in draw_wrapper
draw(artist, renderer, *args, **kwargs)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/axis.py", line 1138, in draw
renderer)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/axis.py", line 1078, in _get_tick_bboxes
extent = tick.label1.get_window_extent(renderer)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/text.py", line 967, in get_window_extent
bbox, info, descent = self._get_layout(self._renderer)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/text.py", line 362, in _get_layout
ismath=ismath)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/backends/backend_agg.py", line 230, in get_text_width_height_descent
renderer=self)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/texmanager.py", line 676, in get_text_width_height_descent
dvifile = self.make_dvi(tex, fontsize)
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/texmanager.py", line 406, in make_dvi
with Locked(self.texcache):
File "/home/users/gholl/venv/stable-3.5/lib/python3.5/site-packages/matplotlib/cbook.py", line 2738, in __enter__
raise self.TimeoutError(err_str)
matplotlib.cbook.TimeoutError: LOCKERROR: matplotlib is trying to acquire the lock
'/home/users/gholl/.cache/matplotlib/tex.cache/.matplotlib_lock-*'
and has failed. This maybe due to any other process holding this
lock. If you are sure no other matplotlib process is running try
removing these folders and trying again.
Unfortunately, the nature of the problem makes it hard to write a minimum code snippet that reproduces it, because it only occurs with big plots when running many processes in parallel.
I'm using Matplotlib 2.0.0rc2 (installed through pip) on Python 3.5.
Metadata
Metadata
Assignees
Labels
No labels