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Fix imshow to work with subclasses of ndarray. #18286

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Merged
merged 3 commits into from
Aug 22, 2020
Merged

Fix imshow to work with subclasses of ndarray. #18286

merged 3 commits into from
Aug 22, 2020

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l-johnston
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@l-johnston l-johnston commented Aug 18, 2020 •
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PR Summary

Closes #18077

In the internals of _ImageBase._make_image, the clip bounds arithmetic fails with ndarray subclasses that support masked arrays such as unyt.

PR Checklist

  • Code is Flake 8 compliant
  • Code has test coverage

jklymak
jklymak approved these changes Aug 18, 2020
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Seems right - OTOH do you have a test?

@jklymak jklymak added this to the v3.4.0 milestone Aug 18, 2020
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I took a look at matplotlib's Quantity defined in test_units.py, but it doesn't have all the ndarray features unyt has that are needed to test the fix. And I didn't want to import unyt.

@jklymak jklymak changed the title Fix imshow to work with subclasses of ndarray. Fix #18077 Fix imshow to work with subclasses of ndarray. Aug 18, 2020
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jklymak commented Aug 18, 2020

(Please don't put the issue in title, but yes, please do put issue in description!)

@l-johnston
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I might be able to implement a skeleton ndarray subclass with just enough features to reproduce the bug and then test the fix. Is this of interest?

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dopplershift commented Aug 18, 2020 •
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If it's a huge amount of effort, I think it would be worthwhile. That should have said: "If it's NOT a huge amount of effort, I think it would be worthwhile."

@l-johnston l-johnston requested a review from jklymak August 20, 2020 11:23
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@dopplershift I implemented the skeleton ndarray subclass that reproduces the bug and validates the fix. Is this sufficient?

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dopplershift approved these changes Aug 21, 2020
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That seems fine to me.

There is a slight question as to whether this should go into test_units.py (see #18278), but I'm not holding this up for that.

@dstansby dstansby merged commit 48b6327 into matplotlib:master Aug 22, 2020
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Thoughts on backporting to 3.3.x as a bugfix?

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Thanks for fixing this !

@l-johnston l-johnston deleted the issue_18077 branch August 22, 2020 12:50
@pllim pllim mentioned this pull request Jan 22, 2024
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@dopplershift dopplershift dopplershift approved these changes

@dstansby dstansby dstansby approved these changes

@jklymak jklymak Awaiting requested review from jklymak

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Imshow breaks if given a unyt_array input
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@l-johnston @jklymak @dopplershift @dstansby @neutrinoceros