[Metagenomics Illumina] fix to single-end problem when running with new setup #79
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- fix to single-end humann3 run where the ref db needs to be explicitly specified - this wasn't always necessary, but it became so a little while back. a fix was already implemented for paired-end, but apparently i didn't catch it for single-end (and it wouldn't cause a problem unless it was the first time a workflow was run on a new system)
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Draft currently until i get confirmation this fixed it from the individual who hit the issue.