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Not able run Either 2.0.0 or 2.1.0

bugSomething isn't workingSomething isn't working

Status: Open.

#496 In nf-core/funcscan;

· kiranpatil222 opened on Sep 18, 2025

Bug in ARG + taxonomy merging

bugSomething isn't workingSomething isn't working

Status: Open.

#491 In nf-core/funcscan;

· jasmezz opened on Aug 14, 2025

Fix eventual ampcombi_parsetables crash

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#489 In nf-core/funcscan;

· jasmezz opened on Jul 22, 2025

Update argNorm to current version

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#487 In nf-core/funcscan;

· jasmezz opened on Jul 17, 2025

Add support for reading external InterProScan results as pipeline input

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#485 In nf-core/funcscan;

· amizeranschi opened on Jul 9, 2025

Add rundbcan for the CAZyme (carbohydrate active enzyme) and CGC (CAZyme Gene Cluster) annotation

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

Enhancement

#481 In nf-core/funcscan;

· Xinpeng021001 opened on Jun 14, 2025

Update Antismash module to v. 8.0.1

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#475 In nf-core/funcscan;

· amizeranschi opened on Apr 29, 2025

Integrate the existing eggNOG-mapper module into the pipeline

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#473 In nf-core/funcscan;

· amizeranschi opened on Apr 13, 2025

Add support for generating mmseqs taxonomy reports

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#466 In nf-core/funcscan;

· amizeranschi opened on Mar 21, 2025

Add sharding

Status: Open.

#460 In nf-core/funcscan;

· jasmezz opened on Mar 3, 2025

· 

2.2 - French Chocolatine

Enable GECCO optional features for integration with other tools

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#450 In nf-core/funcscan;

· amizeranschi opened on Feb 4, 2025

How to speed up MMseqs2 taxonomy assignment with GTDB database on large contigs?

questionFurther information is requestedFurther information is requested

Status: Open.

#424 In nf-core/funcscan;

· lucianhu opened on Oct 18, 2024