ds105 fmri example with single runs being fit #275
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jonathan-taylor
commented
Jun 10, 2013
- Modified the FIAC example to start trying to analyze https://openfmri.org/dataset/ds000105
- Added a block_design function, and options to output individual terms for an experimental factor.
| for j in range(1,13): | ||
| yield i, j | ||
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| ace_vs_scrambled_t/ |
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Is this stuff meant to be here?
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This is legacy from the FIAC example. I just changed the getruns() to match
the subjects/runs of this study. So, the answer is, probably not.
On Tue, Jun 11, 2013 at 9:03 AM, Matthew Brett [email protected]:
In examples/ds105/parallel_run.py:
- if _client is None:
_client = parallel.Client()mydir = os.path.split(os.path.abspath(**file**))[0]def cd(path):import osos.chdir(path)_client[:].apply_sync(cd, mydir)- return _client
+def getruns():
- for i in range(1,7):
for j in range(1,13):yield i, j+ace_vs_scrambled_t/
Is this stuff meant to be here?
—
Reply to this email directly or view it on GitHubhttps://github.com//pull/275/files#r4637010
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Jonathan Taylor
Dept. of Statistics
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Tel: 650.723.9230
Fax: 650.725.8977
Web: http://www-stat.stanford.edu/~jtaylo
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Guys - any progress here? It would be good to merge this soon? |
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Haven't done much since last commit. Not sure what I can / should do to Jonathan On Mon, Aug 12, 2013 at 11:43 AM, Matthew Brett [email protected]:
Jonathan Taylor |
| def getruns(): | ||
| for i in range(1,7): | ||
| for j in range(1,13): | ||
| yield i, j |
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may be just
getruns = itertools.product(range(1, 7), range(1, 13))
?
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OK - I guess we should just merge this one and do more edits with more pull requests. Any objections? |
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I'm fine with it. |
MRG: ds105 fmri example with single runs being fit * Modified the FIAC example to start trying to analyze https://openfmri.org/dataset/ds000105 * Added a block_design function, and options to output individual terms for an experimental factor.