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Subdivision_of now SubProp of part_of #3320

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Subdivision_of now SubProp of part_of #3320

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@dosumis dosumis commented Jul 26, 2024 •
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@dosumis dosumis requested a review from cmungall July 26, 2024 15:13
@dosumis dosumis requested a review from anitacaron as a code owner July 26, 2024 15:13
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dosumis commented Jul 26, 2024

#gogoeditdiff

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Here's a diff of how these changes impact the classified ontology (on -base file):

Ontology comparison

Left

  • Ontology IRI: http://purl.obolibrary.org/obo/uberon/uberon-base.owl
  • Version IRI: http://purl.obolibrary.org/obo/uberon/releases/2024-07-26/uberon-base.owl
  • Loaded from: file:/__w/uberon/uberon/src/ontology/uberon-base-main.owl/uberon-base.owl

Right

  • Ontology IRI: http://purl.obolibrary.org/obo/uberon/uberon-base.owl
  • Version IRI: http://purl.obolibrary.org/obo/uberon/releases/2024-07-26/uberon-base.owl
  • Loaded from: file:/__w/uberon/uberon/src/ontology/uberon-base-pr.owl/uberon-base.owl

Ontology imports

Ontology annotations

subdivision of http://purl.obolibrary.org/obo/uberon/core#subdivision_of

Added

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Here's a diff of your edit file (unreasoned)

Ontology comparison

Left

  • Ontology IRI: http://purl.obolibrary.org/obo/uberon/core.owl
  • Version IRI: None
  • Loaded from: file:/__w/uberon/uberon/master/src/ontology/uberon-edit.obo

Right

  • Ontology IRI: http://purl.obolibrary.org/obo/uberon/core.owl
  • Version IRI: None
  • Loaded from: file:/__w/uberon/uberon/branch/src/ontology/uberon-edit.obo

Ontology imports

Ontology annotations

subdivision of http://purl.obolibrary.org/obo/uberon/core#subdivision_of

Added

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dosumis commented Jul 26, 2024

Surprisingly this has no effect at all on classification! I suspect this is because of part_of assertions that would become redundant if we implement this change.

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This PR has not seen any activity in the past month; if nobody comments or reviews it in the next week, the PR creator will be allowed to proceed with merging without explicit approval, should they wish to do so.

@anitacaron anitacaron removed their request for review November 13, 2024 17:04
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This PR has not seen any activity in the past month; if nobody comments or reviews it in the next week, the PR creator will be allowed to proceed with merging without explicit approval, should they wish to do so.

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make subdivision_of a subproperty_of part_of
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