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  • Institute for Systems Biology
  • Seattle, WA, USA

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  1. sample_snakemake_scGeneticDemux sample_snakemake_scGeneticDemux Public

    This is a repository with a sample structure to run cellsnp-lite and vireo to demultiplex scRNAseq data.

    Python

  2. tube_assay_formation_analysis tube_assay_formation_analysis Public

    extract and analyze relevant information from tube formation assay images (epi-fluorescent microscopy)

    1

  3. pipeline-vessel-analysis pipeline-vessel-analysis Public

    the aim of the pipeline is to automate the detection of the vessel and extract information.

    R 1

  4. IC50 IC50 Public

    R 2