fMRI preprocessing python workshop

School of Cognition academy 2022

Welcome

In this repository, you can find the material and data for the School of Cognition workshop 2022 on functional MRI preprocessing.
The workshop is based on a 2021 tutorial by Frauke Beyer and was updated by Alexander Nitsch and Theo Schäfer.

This repository contains a Jupyter Notebook which describes all the steps in detail.

Setup

Please clone this repository to your jupyter-hub.

1. Go to the jupyter hub and open a terminal at the right upper corner: New -> Terminal

2. Type: git clone https://github.com/theoschaefer/SOC_fMRI_python_workshop.git

3. You have copied the notebooks and data into your jupyter hub and are ready to go.

Open the notebook file fMRI_Preprocessing_Workshop_2022.ipynb