Infer metabolic directions from moment differences of mass-weighted intensity distributions

Generate biomass objective function stoichiometric coefficients for genome-scale models from experimental data

IsoCor: Isotope Correction for mass spectrometry labeling experiments

A Universal Modeling Language for Metabolic Flux Analysis

Estimation of extracellular fluxes and growth rate

Kinetic modeling of glucose and acetate metabolisms in E. coli

A Python package for "classic" Constraint-Based Reconstruction and Analysis (COBRA) and the new COBRA with kinetics (COBRA-k). Link to documentation:

IsoSim: stoichiometric, kinetic and isotopic modeling of metabolic systems

R package for integration of Seahorse extracellular flux (XF) data with metabolic modeling utilizing the R modeling package sybil.

Simultaneous measurement of absolute metabolite concentration and isotope incorporation by mass spectrometry

Repository for yeasts MFA related files

Showcase DynafluxR.

Calculate Flux Dynamics from Dynamic Concentrations of Metabolites

IsoDesign is a scientific tool to design 13C-fluxomics experiments.

Genome-scale metabolic model of mouse brain (iMiceBrain) and case study of Tricyclic pyrone drug

Metabolic simulation of lipid and energy pathways in mouse Genome-scale model and investigation of PFAS congeners' toxicity

Proyecto para las redes metabolicas humanas.