New Numerical Simulation of The Oscillatory Phenomena Occurring in The Bioethanol Production Process
New Numerical Simulation of The Oscillatory Phenomena Occurring in The Bioethanol Production Process
https://doi.org/10.1007/s13399-021-01949-1
ORIGINAL ARTICLE
Received: 8 July 2021 / Revised: 1 September 2021 / Accepted: 3 September 2021 / Published online: 6 October 2021
© The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2021
Abstract
The process of bioethanol production has been characterized with a structured and nonsegregated form of yeast growth
dynamics. In this work, a geometric numerical method is applied to obtain the approximate solution of the oscillatory
phenomena transpiring in the process of bioethanol production. This method is called group preserving scheme which is
based on Lie group, proper for solving ordinary differential equations. In this regard, The Minkowski Cayley transformation
is used to create this numerical method to get the approximate solutions of the problems. Moreover, figures are provided to
show the reliability and accuracy of the proposed method.
biotechnological [21]. The revealed patterns are composed 2 Governing equations and material
to iterate in an uncomplicated form the operation of the
metabolic model of microorganisms. These models should The connections among these metabolic pathways are
be simplistic in the considered design. Through their for- manifested in Fig. 1.
mulization, There is no need to occupy huge information Below through Eqs. (1)–(3), biomass growth scales with
of the processes of biochemical but we need the capability regard to a delivered metabolic route are reported.
to build the most uncomplicated potential map of reactions Glucose fermentation:
of metabolic [22]. Profoundly special enzymes are used to G
r1 = μ1 e1 (1)
catalyse such reactions. The bearing of regulative processes K1 + G
is an essential character of metabolism, that supplies the Ethanol oxidation:
strength to conduct intracellular variations by measuring the E O
r2 = μ2 e2 · (2)
frequency and motion of enzymes that speed up the metabo- K2 + E Ko2 + O
lic responses. A classification of regulative manners is per- Glucose oxidation:
formed by offering cybernetic variables [23]. Such variables G O
are determined in agreement with the selected standard r3 = μ3 e3 · (3)
K3 + G Ko3 + O
function, which is formed particularly for the supposed
problem. A significant trait of such kind of forms attributed The particular germination rate happening in Eqs. (1)–(3) is
to in the literature as “cybernetic”. A considerable number provided by relation (4).
of studies are available displaying cybernetic systems that μi max + β
μi = μi max (4)
are uncomplicated [24–26]. For more details see [36, 37]. α + α∗
In the studied case, a structured and non-separated cyber- The percentage of intracellular enzyme configuration is
netic kinetic design was adopted to explain the increase of displayed by Eqs. (5)–(7).
Saccharomyces cerevisiae microorganisms. The attendance Enzyme catalyse fermentation of glucose:
of three enzymatically managed metabolic routes: glucose G
fermentation (reaction R1 ), oxidation of ethanol (reaction r4 = α (5)
K1 + G
R2 ), and glucose oxidation (reaction R3 ) [27]. The con-
Enzyme catalyse oxidation of ethanol:
nections among these metabolic pathways are manifested in
Fig. 1. E
r5 = α (6)
K2 + E
G(t)
X(t)
0.05
-0.05
-0.1
0
0 200 400 600 0 200 400 600
t t
10 -3
1
0.1
0.5
0.05
O(t)
E(t)
0
0
-0.05 -0.5
-0.1 -1
0 200 400 600 0 200 400 600
t t
Fig. 3 Graphical representation
of approximate solutions for
0
0.01
C(t), e1 (t), e2 (t) and e3 (t)
-0.1
0
e 1(t)
C(t)
-0.2
-0.01
-0.3
-0.4 -0.02
0 500 1000 0 200 400 600
t t
0
0.2
0.1 -2
e 2(t)
e 3(t)
0
-4
-0.1
-0.2 -6
0 200 400 600 0 200 400 600
t t
Biomass Conv. Bioref. (2023) 13:11203–11217 11207
0.05
X(t)
E(t)
0.05
0
-0.05
0 -0.1
-0.1 -0.05 0 0.05 0.1 -0.1 -0.05 0 0.05 0.1
G(t) G(t)
-3
10
1 0
0.5 -0.1
O(t)
C(t)
0 -0.2
-0.5 -0.3
-1 -0.4
-0.1 -0.05 0 0.05 0.1 -0.1 -0.05 0 0.05 0.1
G(t) G(t)
Fig. 5 2D Graphical
representation of approximate 0.01 0.2
solutions
0.1
0
e 1(t)
e 2(t)
0
-0.01
-0.1
-0.02 -0.2
-0.1 -0.05 0 0.05 0.1 -0.1 -0.05 0 0.05 0.1
G(t) G(t)
0
0.1
-2 0.05
e 3(t)
E(t)
0
-4
-0.05
-6 -0.1
-0.1 -0.05 0 0.05 0.1 0 0.05 0.1
G(t) X(t)
11208 Biomass Conv. Bioref. (2023) 13:11203–11217
geometric scheme, is made in the Minkowski space, where- Moreover, using Eqs. (19) and (20), results:
as the traditional numerical methods (non-geometric meth-
d d √
ods) are all formed directly in the usual Euclidean space . u = u · u = u̇ · n = (u, ξ ) · n. (22)
dξ dξ
Avoiding spurious solutions and ghost-fixed points is one of
the advantages of applying the augmented Minkowski space
From Eqs. (21) and (22) it follows:
as a Lie group. Suppose dynamical system matching to a
(u,ξ )
differential equation as follows d u 0N×N u u
= T (u,ξ ) . (23)
dξ u u 0 u
u = (u, t), u ∈ R , t ∈ R,
N
(19)
Clearly, the first equation in Eq. (23) is equal to the one
Next, by applying a description for a vector of the
Eq. (19), but the later equation shows us a Minkowskian
familiarization of the state vector y for Eq. (19), we have
structure of the enlarged state variables of U := (uT , u)T
u ∈ MN+1 (R) which describes an inner product on RN+1
n := , (20) presented as:
u
√ U, E = U T E = u1 e1 + · · · + ul el − uN+1 eN+1 , (24)
where u = u · u > 0 is norm for Euclidean u. From
Eqs. (19) and (20) we can write
where
(u, ξ ) (u, ξ ) IN 0N×1
ṅ := − · n n. (21) = , (25)
u u 01×N −1
Fig. 6 2D Graphical
representation of approximate 10 -3
1 0
solutions
0.5 -0.1
O(t)
C(t)
0 -0.2
-0.5 -0.3
-1 -0.4
0 0.05 0.1 0 0.05 0.1
X(t) X(t)
0.01 0.2
0.1
0
e 1(t)
e 2(t)
0
-0.01
-0.1
-0.02 -0.2
0 0.05 0.1 0 0.05 0.1
X(t) X(t)
Biomass Conv. Bioref. (2023) 13:11203–11217 11209
the Lorentz inner product on RN+1 is the another name of U, U = UT U = 0. (26)
this definition.
Applying novel enlarged variable, Eq. (23) can be formula-
Definition 3.1 Indeed, a null vector in MN+1 (R) contents in ted in the form:
where
For N > 1, HN,1 (0) has a couple of route relevant (u,ξ )
components 0N×N u
ϒ := T (u,ξ ) . (28)
+ u 0
HN,1 (0) = {Y ∈ HN,1 (0) : t > 0},
−
HN,1 (0) = {Y ∈ HN,1 (0) : t < 0}. Definition 3.2 Allow B to be a real square matrix. Next
SN Syml (MN (R)) = {B : B T + B = 0},
The two earlier spaces are normally referred to as the
positive or future pointing light cone and the negative or past is the sense of skew-symmetric matrices’ space in the
pointing cone, sequentially. Minkowskian system.
Fig. 7 2D Graphical
representation of approximate 10 -3
solutions
0 1
0.5
-2
e 3(t)
O(t)
0
-4
-0.5
-6 -1
0 0.05 0.1 -0.1 -0.05 0 0.05 0.1
X(t) E(t)
0
0.01
-0.1
0
e 1(t)
C(t)
-0.2
-0.01
-0.3
-0.4 -0.02
-0.1 -0.05 0 0.05 0.1 -0.1 -0.05 0 0.05 0.1
E(t) E(t)
11210 Biomass Conv. Bioref. (2023) 13:11203–11217
In Eq. (27), we can write ϒ ∈ SN SymN+1 (MN+1 (R)). Also, we own so(N, 1) = SN SymN+1 (MN+1 (R)).
Now set a global group for a group of square matrices: Therefore, in Eq. (27), ϒ ∈ so(N, 1) and alike discretized
G ∈ SO0 (N, 1), obtained from the exponential map (29)
GLk (R) = {G ∈ MN,N : det (G) = 0}. preserve following features:
GT G = , det (Q) = 1. (30)
Admittedly, a subgroup as
Hence, we can offer the numerical scheme as follows:
O(N, 1) = {G ∈ GLN+1 (R) : G G = }.
T
Un+1 = G(n)Un , (31)
So O(N, 1) bears collection of the Lorentzian isometries where Un represents the numerical amount of U at tn ,
RN+1 . Admittedly, for G ∈ O(N, 1) we can express and the group component G(n) is reached from a Cayley
det (G) = ±1. transform:
There is another applicable subgroup of O(N, 1) is
G(n) = [IN − t ϒ(n)]−1 [IN + t ϒ(n)]
⎡ ⎤
2 t 2 T
SO0 (N, 1) = {G ∈ O(N, 1) : det (G) = 1}, IN + u 2 − tn2 n 2 u 22t−utn2 n
n ⎦
=⎣
2
n n n
2 t u T
, (32)
n
2
n
2 un + t n
2
un 2 − t 2 n 2 un 2 − t 2 n 2
which is known as the orthochronous Lorentz group. For
so(N, 1) as a Lie algebra of SO0 (N, 1), an exponential map
Replacing Eq. (32) into Eq. (31) and using first row, we get
can produce the Lie group:
un 2 + t n · un
un+1 = un + 2 t n , (33)
exp : so(N, 1) → SO0 (N, 1). (29) un 2 − t 2 n 2
Fig. 8 2D Graphical
0
representation of approximate
solutions 0.2
0.1 -2
e 2(t)
e 3(t)
0
-4
-0.1
-0.2 -6
-0.1 -0.05 0 0.05 0.1 -0.1 -0.05 0 0.05 0.1
E(t) E(t)
0
0.01
-0.1
0
e 1(t)
C(t)
-0.2
-0.01
-0.3
-0.4 -0.02
-1 -0.5 0 0.5 1 -1 -0.5 0 0.5 1
O(t) -3 O(t) -3
10 10
Biomass Conv. Bioref. (2023) 13:11203–11217 11211
or and
un+1 = un + ηn n . (34) ⎡ ⎤
G(t)
So, we can apply the proposed to solve Eq. (10) along ⎢ X(t) ⎥
⎢ ⎥
with initial conditions (18). Regarding Eq. (19), we can ⎢ E(t) ⎥
⎢ ⎥
formulate: ⎢ O(t) ⎥
⎢
u=⎢ ⎥. (36)
⎥
⎢ C(t) ⎥
⎡ ⎤ ⎢ e1 (t) ⎥
⎢ ⎥
⎣ e2 (t) ⎦
r1 v1 r3 v3
⎢D · (Go −G)− Y1 + Y3 · X−ϕ4 C · dt +X · dt ⎥
dX dC
⎢ ⎥
⎢ ⎥ e3 (t)
⎢ −D · X + X · i (ri vi ) ⎥
⎢ ⎥
⎢ ⎥
⎢ r1 v1 r2 v2 ⎥
⎢ −D · E + ϕ1 Y1 − Y2 · X ⎥
⎢ ⎥
⎢ ⎥ The next section is devoted to showing the performance of
⎢ ∗ r v r3 v3 ⎥
⎢ −D · O + KLa · (O − O) − ϕ2 Y2 + ϕ3 Y3 · X ⎥ 2 2
the presented method.
(u, t)= ⎢
⎢
⎥.
⎥
⎢ ⎥
⎢ γ r v
3 3 3 − (γ r v
1 1 1 + γ r
2 2 2v )C − (r v
i i i )C ⎥
⎢ ⎥
⎢ ⎥
⎢ r u − (r v ) + β e + α ∗ ⎥
⎢ 4 1 i i i 1 ⎥ 4 Numerical results and discussion
⎢ ⎥
⎢ ⎥
⎢ r u − (r v ) + β e + α ∗ ⎥
⎢ 5 2 i i i 2 ⎥
⎣ ⎦ Now, we use the proposed method to obtain the numerical
∗
r6 u3 − i (ri vi ) + β e3 + α solutions of the studied model by under choosing the
(35) following initial conditions:
Fig. 9 2D Graphical
representation of approximate
0
solutions 0.2
-2 0.1
e 3(t)
e 2(t)
0
-4
-0.1
-6 -0.2
-0.4 -0.3 -0.2 -0.1 0 -0.02 -0.01 0 0.01
C(t) e 1(t)
0 0
-2 -2
e 3(t)
e 3(t)
-4 -4
-6 -6
-0.02 -0.01 0 0.01 -0.2 -0.1 0 0.1 0.2
e 1(t) e 2(t)
11212 Biomass Conv. Bioref. (2023) 13:11203–11217
O(t)
E(t)
0
0
-0.05 -1
0.1 0.1
0.1 0.1
0.05 0 0.05 0
0 -0.1 0 -0.1
X(t) G(t) X(t) G(t)
0 0.01
-0.1
0
e 1(t)
C(t)
-0.2
-0.01
-0.3
-0.02
0.1 0.1
0.1 0.1
0.05 0 0.05 0
0 -0.1 0 -0.1
X(t) G(t) X(t) G(t)
0
0.2
0.1 -2
e 2(t)
e 3(t)
0
-4
-0.1
0.1 0.1
0.1 0.1
0.05 0 0.05 0
0 -0.1 0 -0.1
X(t) G(t) X(t) G(t)
10 -3
1 0
-0.1
O(t)
C(t)
0
-0.2
-0.3
-1
0.1 0.1 0.1 0.1
0.05 0 0.05 0
0 0
-0.05 -0.1 -0.05 -0.1
E(t) G(t) E(t) G(t)
Biomass Conv. Bioref. (2023) 13:11203–11217 11213
0.01 0.2
0 0.1
e 1(t)
e 2(t)
0
-0.01
-0.1
-0.02
0.1 0.1 0.1 0.1
0.05 0 0.05 0
0 0
-0.05 -0.1 -0.05 -0.1
E(t) G(t) E(t) G(t)
0 0
-2 -0.1
e 3(t)
C(t)
-0.2
-4
-0.3
1
0.1 0.1 0.1
0.05 0 0 0
0 -3
-0.1 10 -0.1
-0.05 -1
E(t) G(t) O(t) G(t)
0.01 0.2
0 0.1
e 1(t)
e 2(t)
0
-0.01
-0.1
-0.02
1 1
0.1 0.1
-3 0 0 -3 0 0
10 -0.1 10 -0.1
-1 -1
O(t) G(t) O(t) G(t)
0
0.01
-2 0
e 3(t)
e 1(t)
-4 -0.01
-0.02
1 0
0.1 -0.1 0.1
-3 0 0 -0.2 0
10 -0.1 -0.3 -0.1
-1
O(t) G(t) C(t) G(t)
11214 Biomass Conv. Bioref. (2023) 13:11203–11217
0
0.2
0.1 -2
e 2(t)
e 3(t)
0
-4
-0.1
0 0
-0.1 0.1 -0.1 0.1
-0.2 0 -0.2 0
-0.3 -0.1 -0.3 -0.1
C(t) G(t) C(t) G(t)
0
0.2
0.1 -2
e 2(t)
e 3(t)
0
-4
-0.1
0.01 0.01
0 0.1 0 0.1
-0.01 0 -0.01 0
-0.02 -0.1 -0.02 -0.1
e 1(t) G(t) e 1(t) G(t)
-2
e 3(t)
O(t)
0
-4
-1
0.2 0.1 0.1 0.1
0.1 0.05
0 0 0 0.05
-0.1 -0.1 -0.05 0
e 2(t) G(t) E(t) X(t)
0 0.01
-0.1
0
e 1(t)
C(t)
-0.2
-0.01
-0.3
-0.02
0.1 0.1 0.1 0.1
0.05 0.05
0 0.05 0 0.05
-0.05 0 -0.05 0
E(t) X(t) E(t) X(t)
Biomass Conv. Bioref. (2023) 13:11203–11217 11215
0
0.2
0.1 -2
e 2(t)
e 3(t)
0
-4
-0.1
0 0.01
-0.1
0
e 1(t)
C(t)
-0.2
-0.01
-0.3
-0.02
1 1
0 0.1 0 0.1
-3 0.05 -3 0.05
10 0 10 0
-1 -0.05 -1 -0.05
O(t) E(t) O(t) E(t)
0
0.2
0.1 -2
e 2(t)
e 3(t)
0
-4
-0.1
1 1
0 0.1 0 0.1
0.05 0.05
10 -3 0 10 -3 0
-1 -0.05 -1 -0.05
O(t) E(t) O(t) E(t)
0.01 0.2
0 0.1
e 1(t)
e 2(t)
0
-0.01
-0.1
-0.02
0 0
-0.1 1 -0.1 1
-0.2 0 -0.2 0
-0.3
-1 10 -3 -0.3
-1 10 -3
C(t) O(t) C(t) O(t)
11216 Biomass Conv. Bioref. (2023) 13:11203–11217
0
0.2
-2 0.1
e 2(t)
e 3 (t)
0
-4
-0.1
0.2 0.01
0.1 0.01 0 0
0 0 -0.1
-0.1 -0.01 -0.01 -0.2
-0.02 -0.02 -0.3
e 2 (t) e 1 (t) e 1(t) C(t)
0 0
-2 -2
e 3(t)
e 3(t)
-4 -4
0.01 0.2
0 0 0.1 0
-0.1 0 -0.1
-0.01 -0.2 -0.1 -0.2
-0.02 -0.3 -0.3
e 1(t) C(t) e 2(t) C(t)
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