01 Unit C Notes
01 Unit C Notes
The Cell 10
The Cell as an Efficient, Open System 10
Chemical Composition of Cells 10
Cell Structures and Functions 11
Comparing Plant and Animal Cells 14
Early Microscopy
Hans and Zacharias Janssen, Dutch lens-makers, invented the
microscope in about 1595, using a two-lens system of an
eyepiece, or ocular lens, and an objective lens.
● This was the first compound microscope, meaning that it
made use of more than one lens to magnify objects.
● The Janssens’ microscope had a magnifying power of
approximately 20X.
At about the same time as Robert Hooke was studying cork cells, a Dutch businessman,
Antoni van Leeuwenhoek, was using a simple single-lens microscope similar to a
magnifying glass.
● Because of van Leeuwenhoek’s skill in making the tiny lenses for his microscopes, he
was able to produce higher magnifications than those of the compound microscopes
of the day (up to 250X).
● He was the first to see the movement of different types of single cells that we now
know as bacteria, sperm, and unicellular protozoa.
● These were the first observations of individual free-living cells surviving as
independent systems.
● Van Leeuwenhoek made careful drawings of his discoveries and named them animalcules.
Spontaneous Generation
The idea that life could emerge spontaneously from non-living matter - called abiogenesis or
spontaneous generation - was widely accepted from the time of the Romans through to the 19th
century.
In 1668, Francesco Redi, an Italian physician and poet, questioned the belief that maggots appeared
spontaneously from raw meat.
● He believed that flies laid their eggs in the meat and set up an experiment to test his hypothesis.
● He set out flasks containing raw meat, but some were sealed, some were covered in gauze, and
some were open to the air.
● Maggots were found only in the flasks that were open and accessible to flies to lay their eggs.
● Despite the evidence, the idea of spontaneous generation continued to thrive.
In 1864, the French chemist Louis Pasteur disproved the theory of spontaneous generation.
● Pasteur heated the neck of the flask and bent it into an S-shape, allowing air to reach the boiled
broth, but trapping microorganisms and other particles in the S-bend.
● Nothing grew in this broth, but if the flask was tipped so that the broth reached the S-bend in the
neck or if the neck was broken, there would be microbial growth.
Think About It!
Identify the manipulated, responding, and controlled variables in Pasteur’s experiment.
● Pasteur provided strong evidence that spontaneous generation did not occur and that life arises
through biogenesis.
○ Biogenesis is the development of living things from other living things through reproduction.
Schleiden discussed his work with a friend, Theodor Schwann, who was studying animal physiology.
● When Schwann searched for the opaque spots in animal tissue, he found the nucleus structure that
Brown and Schleiden had identified.
● Schwann and Schleiden proposed that all plants and animals were composed of cells and that the
cell was the basic unit of all organisms.
In 1859, the cell theory was further extended by Rudolf Virchow’s statement that all cells arise only
from pre-existing cells.
The cell theory applies to all living things regardless of their size, shape, or the number of cells involved.
Developments in Imaging Technology and Staining
Techniques
Learning Outcomes
Explain the relationship between developments in imaging technology and the current understanding
of the cell
● describe how advancements in knowledge of cell structure and function have been enhanced and
are increasing as a direct result of developments in microscope technology and staining
techniques
Light microscopes magnify images through the use of one or more curved lenses and a light source.
Staining
Experiments with stains or colouring agents showed that particular stains
attached to particular parts of the cell, improving the contrast between
internal structures.
● One disadvantage of these techniques is that staining kills the cells, so
it is not possible to view living tissue.
Confocal Technology
Invented in the 1980s, confocal laser scanning microscope (CLSM) uses a
laser to concentrate light onto a specimen.
● The reflection passes through a tiny opening called the confocal
pinhole and reaches an electronic detector that converts the light into
an image.
● Only the in-focus light can pass through the pinhole to the detector,
resulting in a high resolution image.
Electron Microscopy
In the 1930s at the University of Toronto, James Hillier and Albert Prebus developed the first functional
electron microscope.
● An electron microscope uses a beam of electrons instead of a light wave and is able to produce high
resolution images with greater magnification than light microscopes, however they are quite
expensive.
The Transmission Electron Microscope (TEM) uses a beam of electrons passed through a very thin
section of the specimen.
● The electrons that pass through the specimen fall on a fluorescent screen or on photographic film
and black-and-white photographs are produced.
● The TEM may operate at magnifications of up to 1 500 000X and has a resolution of about 2.5 nm.
● One of the drawbacks of the TEM is that the specimens are chemically fixed, and therefore no
longer living.
The Scanning Electron Microscope (SEM), developed in the 1940s, gives information about the surface
features of a specimen.
● Specimens are covered with an electron-dense material like gold, which reflects electrons.
● Electrons bouncing off the surface are picked up by a sensor and a three-dimensional image is
formed.
● The SEM operates up to a magnification of 300 000X and has a resolution of 20 nm.
● One of the drawbacks of the SEM is that the specimens are chemically fixed, and therefore no longer
living.
Cell Research at the Molecular Level
Learning Outcomes
Explain the relationship between developments in imaging technology and the current understanding
of the cell
● identify areas of cell research at the molecular level
Gene Mapping
Improvements in techniques of molecular biology allowed for mapping of the human genome.
● In 2001, a draft of the complete genetic map of humans was published in the results of the Human
Genome Project.
● The mapping of DNA sequences in genes involves breaking cells down to release their DNA, using
chemical techniques to make many copies of the DNA, and finding the sequence of chemical
subunits through computer analysis.
DNA analysis and gene mapping open up our understanding of the way different parts of the genetic
material work together.
● This knowledge has allowed scientists to manage disease-causing genetic abnormalities and to begin
to target cancer treatments to the genetics of the cancer cells.
● Gene mapping of crop plants has contributed to the development of new varieties that are resistant
to pests or can thrive in drought conditions.
Cells maintain these life processes within specialized membrane-bound structures called organelles.
● Ribosomes are the only organelle not enclosed by a membrane.
The cell membrane is a protective barrier for the cell: it allows the transport of
materials into and out of the cell; it is important for cell communication.
The nucleus contains DNA, the genetic material of the cell, that directs all cellular
activities. The nucleus is surrounded by the nuclear envelope, which has pores to
allow the transport of materials.
The cytoplasm is a gel-like substance inside the cell membrane where the
organelles are suspended; it contains the nutrients required by the cell to carry on
the life processes.
The cell wall is found in plant cells; the cell wall is a rigid frame around the cell
that provides strength and support.
Chloroplasts are found only in plants. They contain a pigment called chlorophyll
that produces a green colour; they are the sites of photosynthesis, the process
which uses energy from the Sun to convert carbon dioxide and water into glucose
(sugar) for the plant’s use and storage. The equation for photosynthesis is:
Vacuoles are membrane-bound vesicles that store water. Plant cells have a large
central vacuole.
The Golgi apparatus is consists of flat, disc-shaped sacs involved in secretion. The
Golgi receives substances from the endoplasmic reticulum and packages them
into vesicles for transport.
Concentration Gradients
The difference in the concentration of a substance between two areas is called the concentration
gradient.
● Substances tend to move along or with their concentration gradient until equilibrium is reached.
○ Particles are still moving at equilibrium, but they maintain an overall balanced, even
distribution.
● The bigger the difference in concentration, the steeper the concentration gradient and the faster
the molecules of a substance will diffuse.
Osmosis
Osmosis is the movement of water molecules along their concentration gradient from an area of higher
water concentration/lower solute concentration to an area of lower water concentration/higher solute
concentration.
● Osmosis is a form of passive transport.
● If there is a concentration gradient across the cell membrane, but the solute molecules are not able
to pass through, there will be a net movement of water molecules through the cell membrane.
To predict the direction in which a net movement of water will occur, we need to compare the solute
concentration.
● A solution that has a higher concentration of solutes than that in a cell is said to be hypertonic to
the cell.
○ If the cell is put into this solution, water will leave the cell.
● A solution that has a lower concentration of solutes than that in a cell is said to be hypotonic to the
cell.
○ If the cell is put into this solution, water will enter the cell.
● A solution that has the same concentration of solutes as that in the cell is said to be isotonic to the
cell.
○ If a cell is put into an isotonic solution, there is no net movement of water molecules.
The figure below shows the response of an animal cell to three different conditions in the environment.
Facilitated Diffusion
Substances that are soluble in water but not in lipids, are charged, or are too large to diffuse across the
cell membrane cross by facilitated diffusion.
● Facilitated diffusion is a form of passive transport because no added energy is needed for the
process to occur since particles are moving along their concentration gradient.
● Channel proteins create pores or channels through which small, water-soluble particles move along
the concentration gradient.
● Carrier proteins attach to larger molecules, change shape and physically move the molecule across
the membrane and into the cell.
○ Once the molecule has been transported, the protein returns to its original shape.
Active Transport
Active transport is the movement of particles across the cell membrane against the
concentration gradient using carrier proteins.
● This requires energy input in the form of ATP.
● Active transport is necessary to concentrate materials such as nutrients inside the cell or
for the expulsion of waste materials even though they are at a higher concentration on
the outside of the cell.
● The carrier proteins work almost as a pump to move molecules or ions across the
membrane.
Endocytosis and Exocytosis
Endocytosis is when a vesicle forms around the particle and the cell membrane pinches off around it so
that the vesicle is inside the cell.
● This occurs when molecules that need to be taken in by the cell are too large to pass across the cell
membrane, even with the help of protein carriers.
● It is a form of active transport because it requires ATP energy for the rearrangement of the cell
membrane.
Exocytosis is when a vesicle surrounds the particle, then fuses with the plasma membrane, releasing its
contents into the surroundings.
● This occurs when the cell must rid itself of large waste particles, or when a secretory cell releases
product molecules.
● It is a form of active transport because it requires ATP energy for the rearrangement of the cell
membrane.
Cell Size and Shape
Learning Outcomes
Describe the function of cell organelles and structures in a cell, in terms of life processes, and use
models to explain these processes and their applications
● describe cell size and shape as they relate to surface area to volume ratio, and explain how that
ratio limits cell size
Maintaining a high surface area to volume ratio of a cell is needed for the cell to effectively transport
oxygen, nutrients, and wastes at a rate that sustains cellular activities.
● As the volume of a cell increases, the surface area-to-volume ratio decreases, thus cells tend to be
small in size.
● The greater the surface area to volume ratio, the more efficient cell transport will be.
Example Problem
Determine the surface area to volume ratio for cube-shaped cells with the side lengths listed. Which cell
would be most efficient in transporting substances?
a) 1.0cm b) 2.5cm c) 4.0cm
Try It!
Determine the surface area to volume ratio of a rectangular prism that has:
length = 2.5 cm; width = 2.0 cm; and height = 1.0 cm
Cell Shape
Many cells are specialized to increase surface area.
● Intestinal cell membranes have hair-like projections called microvilli to allow for the rapid
absorption of nutrients
● Red blood cells have a biconcave shape to allow for the rapid transport of carbon dioxide and
oxygen.
Specialization of Cells, Tissues, and Systems in
Plants
Learning Outcomes
Analyze plants as an example of a multicellular organism with specialized structures at the cellular,
tissue and system levels
● explain why, when a single-celled organism or colony of single-celled organisms reaches a certain
size, it requires a multicellular level of organization, and relate this to the specialization of cells,
tissues and systems in plants
● describe how the cells of the leaf system have a variety of specialized structures and functions;
i.e., epidermis including guard cells, palisade tissue cells, spongy tissue cells, and phloem and
xylem vascular tissue cells to support the process of photosynthesis
Plants are multicellular organisms made up of many parts, each performing its own important function.
● Groups of cells performing the same function together are called tissues.
● Tissues contributing to the same function form organs which are part of organ systems.
○ E.g., the leaf is an organ that is a part of the shoot organ system and its main purpose is to carry
out the process of photosynthesis.
3. Vascular tissue is responsible for the transport of materials throughout the plant.
● Xylem tissue moves water and dissolved minerals from the roots up the stem to the
leaves where these substances are used in photosynthesis.
○ Xylem vessels are thick-walled tubes.
○ As the cylindrical cells mature, they fuse together and the walls at each end
become perforated.
○ The contents of the cytoplasm break down, and the cells die, leaving the non-living
cell walls attached together like a long straw.
● Phloem tissue transports sucrose and other dissolved sugars from the leaves to other
parts of the plant.
○ Phloem vessels are formed from individual long sieve tube cells, which have
perforated end walls, through which the cytoplasm extends.
○ The sieve tube cells remain alive, but lose their nuclei at maturity.
○ In many plants, sieve tube cells are connected to small, nucleated companion cells
that appear to direct their activities.
Specialization in the Leaf and Gas Exchange
Learning Outcomes
Analyze plants as an example of a multicellular organism with specialized structures at the cellular,
tissue and system levels
● describe how the cells of the leaf system have a variety of specialized structures and functions;
i.e., epidermis including guard cells, palisade tissue cells, spongy tissue cells, and phloem and
xylem vascular tissue cells to support the process of photosynthesis
● explain and investigate the gas exchange system in plants; i.e., lenticels, guard cells, stomata and
the process of diffusion
Dermal Tissue
The cells of the epidermis are clear to allow the light needed for photosynthesis to enter the leaf.
Specialized cells in the epidermis, called guard cells, form tiny openings called stomata that allow gas
exchange to happen.
● The majority of stomata are found in the lower epidermis on the underside of the leaf to prevent
water loss.
● Oxygen gas and carbon dioxide gas diffuse along their concentration gradients between the air and
the leaf through the stomata.
The guard cells that surround the stomata control whether they are open or closed.
● Light striking the leaf stimulates the guard cells to accumulate potassium ions by active transport.
○ As a result, the number of particles present in the guard cells increases, water enters by
osmosis, and the guard cells swell up under increased turgor pressure, opening the stoma.
● When light is not striking the leaf, the potassium ions are no longer being actively transported into
the guard cells.
○ The potassium ions will diffuse out of the guard cells, water will follow by osmosis, and the
stomata will close.
Water is continually being lost from the plant by transpiration through the stomata.
● In conditions where water is not readily available, the turgor pressure decreases and guard cells
become limp, closing the stomata to prevent water loss.
● Stomata also close at night to prevent water loss.
In woody plants, the epidermis of the stem is replaced by cork and bark during the secondary growth
stage of development.
● Lenticels are pores found on the stems of woody plants that provide a pathway for gas exchange
and transpiration.
Ground Tissue
Between the upper epidermis and the lower epidermis of the leaf are specialized ground tissues called
mesophyll.
● The palisade tissue is found just below the upper epidermis.
○ The cells are tightly packed together to maximize exposure to the Sun.
○ Responsible for photosynthesis, so they contain many chloroplasts.
● Between the palisade tissue cells and the lower epidermis is the spongy mesophyll tissue.
○ The increased space between cells allows for gases to diffuse throughout the leaf.
○ The cells of the spongy mesophyll tissue also contain some chloroplasts for photosynthesis.
Vascular Tissue
The xylem and phloem tissues are bundled in a vascular bundle that forms the veins of the leaf.
● The vascular tissue provides the leaf with the water needed for photosynthesis and transports the
sugars formed in photosynthesis throughout the plant.
● The vascular bundles of the leaf are direct extensions of the vascular bundles of the stem.
○ They branch into finer veins within the spongy mesophyll.
Transport Systems in Plants
Learning Outcomes
Analyze plants as an example of a multicellular organism with specialized structures at the cellular,
tissue and system levels
● explain and investigate the transport system in plants; i.e., xylem and phloem tissues and the
processes of transpiration, including the cohesion and adhesion properties of water, turgor
pressure and osmosis; diffusion, active transport and root pressure in root hairs
Phototropism
Phototropism is the directional growth of a plant in response to the stimulus of light.
● Stems exhibit positive phototropism, meaning that they grow toward light.
○ This allows the shoots to obtain the sunlight required for photosynthesis.
● Roots show a weak negative phototropism because they grow away from the light.
○ This allows roots to grow into the soil and obtain water and minerals.
Investigations of Phototropism
In 1880, Charles and Francis Darwin investigated which part of the plant detected and responded to the
phototropic stimulus.
● The seedlings with the tips covered did not respond to light, and so they were able to conclude that
the tip of the stem was the area responsible for the detection of the light stimulus.
● Plants with everything except the tips buried still showed a growth response toward the light.
● The Darwins inferred that the cells of the tip were somehow communicating with the cells in the
area of the bending.
In 1913, Peter Boysen-Jensen investigated how the tip was communicating with the
area of elongation.
● The area of elongation was lower on the stem and facing away from the light
source.
○ It was called the area of elongation because the phototropic response was
created by the elongation of cells on the side of the leaf facing away from the
light, causing the leaf to bend toward the light.
● Boysen-Jensen snipped off the tip of the grass seedlings, covered the stump with
gelatin, and replaced the tip—phototropism continued normally.
● He then tried the same procedure using a thin slice of the mineral mica instead of
the gelatin—phototropism was not observed.
● Boysen-Jensen concluded that whatever was responsible for communicating stimulus information
from the tip to the area of elongation was able to diffuse through the gelatin, but not through the
mica.
● He suggested that the growth response could only be accomplished as a result of a chemical moving
from the tip to the area of elongation.
In 1926, F. W. Went investigated the specific substance responsible for initiating the phototropic
response.
● He was able to isolate this chemical substance that was later given the name auxin.
● Since then, analysis of the chemical substance has indicated that the auxin is a hormone, a chemical
compound that is manufactured in one area and transported to another location where it has the
ability to initiate a physiological response—in this case, cell elongation.
Gravitropism
Gravitropism is the growth of plants in response to Earth’s gravitational force.
● Stems grow against the gravitational force, exhibiting negative gravitropism.
● Roots grow toward the gravitational force, exhibiting positive gravitropism.
● Scientists believe that plants rely on heavy starch particles in specialized cells as indicators of gravity.
○ If a plant is tipped, the starch grains shift and settle in a new location due to gravity.
○ When the starch grains do this in the root cells, it is thought that the movement is detected by
the plant, and a growth response results.