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ML Assignment 9

The document outlines a process for applying Principal Component Analysis (PCA) to the heart_disease dataset for binary classification using logistic regression. It includes steps for data loading, preprocessing, PCA transformation, and model training and evaluation, achieving an accuracy of approximately 85.25%. The code snippets provided guide the user through each stage of the analysis.

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anuj rawat
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20 views2 pages

ML Assignment 9

The document outlines a process for applying Principal Component Analysis (PCA) to the heart_disease dataset for binary classification using logistic regression. It includes steps for data loading, preprocessing, PCA transformation, and model training and evaluation, achieving an accuracy of approximately 85.25%. The code snippets provided guide the user through each stage of the analysis.

Uploaded by

anuj rawat
Copyright
© © All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
Available Formats
Download as PDF, TXT or read online on Scribd
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9w3itlede

January 3, 2025

0.1 Apply PCA on heart_disease.csv for implementing binary classification.


Please refer to the meta data of heart_disease data before implementation.
[1]: import pandas as pd
import numpy as np
from sklearn.model_selection import train_test_split
from sklearn.preprocessing import StandardScaler
from sklearn.decomposition import PCA
from sklearn.linear_model import LogisticRegression
from sklearn.metrics import accuracy_score

# Load the dataset


url = "https://itv-contentbucket.s3.ap-south-1.amazonaws.com/Exams/ML/PCA/
↪heart_disease.csv"

data = pd.read_csv(url)

# Display the first few rows


print(data.head())

age sex cp trestbps chol fbs restecg thalach exang oldpeak slope \
0 63 1 3 145 233 1 0 150 0 2.3 0
1 37 1 2 130 250 0 1 187 0 3.5 0
2 41 0 1 130 204 0 0 172 0 1.4 2
3 56 1 1 120 236 0 1 178 0 0.8 2
4 57 0 0 120 354 0 1 163 1 0.6 2

ca thal target
0 0 1 1
1 0 2 1
2 0 2 1
3 0 2 1
4 0 2 1

[2]: # Check for missing values


print(data.isnull().sum())

# Drop or fill missing values as required


data = data.dropna() # Example of dropping missing values

1
age 0
sex 0
cp 0
trestbps 0
chol 0
fbs 0
restecg 0
thalach 0
exang 0
oldpeak 0
slope 0
ca 0
thal 0
target 0
dtype: int64

[3]: # Example assuming 'target' is the target column based on typical naming
X = data.drop('target', axis=1) # Replace 'target' with the actual target␣
↪column name

y = data['target'] # Replace 'target' with the actual target column name

[4]: X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2,␣


↪random_state=42)

[5]: scaler = StandardScaler()


X_train = scaler.fit_transform(X_train)
X_test = scaler.transform(X_test)

[6]: # Choose the number of principal components to keep (e.g., 2 components)


pca = PCA(n_components=2)
X_train_pca = pca.fit_transform(X_train)
X_test_pca = pca.transform(X_test)

print(f'Explained Variance Ratio: {pca.explained_variance_ratio_}')

Explained Variance Ratio: [0.2072575 0.12434085]

[7]: model = LogisticRegression()


model.fit(X_train_pca, y_train)

[7]: LogisticRegression()

[8]: y_pred = model.predict(X_test_pca)


accuracy = accuracy_score(y_test, y_pred)
print(f'Accuracy: {accuracy}')

Accuracy: 0.8524590163934426

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