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👋 Hi, I’m @thomazbastiaanssen
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🦠 I am a bioinformatician interested in the role of host-microbial co-metabolism in mental health.
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🏥 I work at the Amsterdam University Medical Centres:
- 🧠 Department of Psychiatry,
- 🌍 Amsterdam Public Health research institute.
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🪪 Visit my website to learn more about my research.
Published in Nature: Mental Health in two parts: part 1, part 2.
Pre-prints with original figures freely available: part 1, part 2.
The annotated supplementary tutorial in R also be found here.
| package | description | |
|---|---|---|
| 🗃️ | MultiFactor | S7 classes for relational data |
| 🧶 | ariadne | Import and wrangle relational data |
| 🕷️ | anansi | Analysis of specific feature-pair interactions |
| 🦉 | pallas | Compose and send SPARQL queries from R |
| ⛵ | argonaut | Tools for stratified analysis |
| package | description | |
|---|---|---|
| 🌀 | volatility | Compute microbial instability over time |
| ⏳ | kronos | Estimate and compare circadian rhythmicity |