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aourednik / SPARQLchunks

Allows to run SPARQL chunks in R-markdown files. Also privides inline functions to send a SPARQL query to an endpoint and retrieve data in dataframe or list form.

R 8 1 Updated Jul 8, 2025

Benjamin-Valderrama / saMBA-pipeline

Workflow to build archives of 16s faecal microbiome samples from neglected populations.

R 4 Updated May 31, 2025

sterrettJD / HoMi

Host-microbiome dual transcriptome pipeline

Python 2 Updated Dec 6, 2025