Peek inside Parquet files right from your terminal

Aggregate results from bioinformatics analyses across many samples into a single report.

Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

Simple test framework for Nextflow pipelines

Nail is an Alignment Inference tooL

Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.

Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD!

Cython bindings and Python interface to HMMER3.

Generation and updating of protein families

Application to assign secondary structure to proteins

A linter for Nextflow built on top of the Nextflow Language Server

AlphaFold 3 inference pipeline.

Interactive 3D visualization of networks with multiple layers

Protein 3D structure prediction pipeline

MMseqs2: ultra fast and sensitive search and clustering suite

Remote protein homology detection suite.

Compressing protein structures effectively with torsion angles

A DSL for data-driven computational pipelines

Test data to be used for automated testing with the nf-core pipelines

Repository to host tool-specific module files for the Nextflow DSL2 community!

Microbiome Informatics NF modules and subworkflows

Flame: Functional enrichment analysis using multiple gene lists