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GitHub Actions: Install Nextflow for sync #547

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Merged
ewels merged 1 commit into from
Feb 20, 2020
Merged

GitHub Actions: Install Nextflow for sync #547

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7 changes: 7 additions & 0 deletions .github/workflows/sync.yml
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Expand Up @@ -22,6 +22,13 @@ jobs:
python -m pip install --upgrade pip
pip install .

- name: Install Nextflow
run: |
mkdir /tmp/nextflow
cd /tmp/nextflow
wget -qO- get.nextflow.io | bash
sudo ln -s /tmp/nextflow/nextflow /usr/local/bin/nextflow

- name: Run synchronisation
if: github.repository == 'nf-core/tools'
env:
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2 changes: 1 addition & 1 deletion CHANGELOG.md
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Expand Up @@ -7,7 +7,7 @@
* Travis CI tests are now deprecated within the pipeline template. Please switch to GitHub Actions.
* `nf-core bump-version` support has been removed for `.travis.yml`
* `nf-core lint` now fails if a `.travis.yml` file is found
* Ported nf-core/tools Travis CI automation to GitHub Actions
* Ported nf-core/tools Travis CI automation to GitHub Actions.
* Fixed the build for the nf-core/tools API documentation on the website

### Template
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