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Merged
ewels merged 1 commit into from
Mar 23, 2021
Merged

Find yml and yaml files for yaml linting #948

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4 changes: 2 additions & 2 deletions nf_core/pipeline-template/.github/workflows/linting.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -57,7 +57,7 @@ jobs:
- name: Install yaml-lint
run: npm install -g yaml-lint
- name: Run yaml-lint
run: yamllint $(find ${GITHUB_WORKSPACE} -type f -name "*.yml")
run: yamllint $(find ${GITHUB_WORKSPACE} -type f -name "*.yml" -o -name "*.yaml")

# If the above check failed, post a comment on the PR explaining the failure
- name: Post PR comment
Expand All @@ -73,7 +73,7 @@ jobs:
* Install `yaml-lint`
* [Install `npm`](https://www.npmjs.com/get-npm) then [install `yaml-lint`](https://www.npmjs.com/package/yaml-lint) (`npm install -g yaml-lint`)
* Fix the markdown errors
* Run the test locally: `yamllint $(find . -type f -name "*.yml")`
* Run the test locally: `yamllint $(find . -type f -name "*.yml" -o -name "*.yaml")`
* Fix any reported errors in your YAML files

Once you push these changes the test should pass, and you can hide this comment :+1:
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