$  nf-core launch methylseq

                                          ,--./,-.
          ___     __   __   __   ___     /,-._.--~\
    |\ | |__  __ /  ` /  \ |__) |__         }  {
    | \| |       \__, \__/ |  \ |___     \`-._,-`-,
                                          `._,._,'


INFO: Launching nf-core/methylseq


INFO: Main nextflow options:

Config profile to use [standard]:
Unique name for this nextflow run [False]: Phil's test run
Work directory for intermediate files [work]:
Resume a previous workflow run [False]: true
Release / revision to use [False]: 1.0

INFO: Pipeline specific parameters:

--mindepth [0]:
--nodedup [false]: true
--reads ['data/*_R{1,2}.fastq.gz']:
--numMismatches [0.6]:
--igenomes_base ['s3://ngi-igenomes/igenomes/']:
--container ['nfcore/methylseq:1.0']:
--notrim [false]: false
--max_memory ['128 GB']: 64 GB
--version ['1.0']:
--saveReference [false]:
--unmapped [false]: false
--max_cpus [16]:
--saveTrimmed [false]:
--non_directional [false]:
--comprehensive [false]:
--aligner ['bismark']:
--outdir ['./results']:
--relaxMismatches [false]:
--singleEnd [false]:
--saveAlignedIntermediates [false]:
--nf_required_version ['0.27.6']:
--ignoreFlags [false]:
--max_time ['10d']:
--multiqc_config ['/Users/ewels/.nextflow/assets/nf-core/methylseq/conf/multiqc_config.yaml']:

INFO: Nextflow command:
  nextflow run nf-core/methylseq -name "Phil's test run" -resume -r "1.0" --nodedup --max_memory "64 GB"


Do you want to run this command now? [y/N]: y

INFO: Launching!