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Stale GH action #2183

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Merged
mirpedrol merged 7 commits into from
Mar 30, 2023
Merged

Stale GH action #2183

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11253e7
add stale GHA in tools
mirpedrol Feb 16, 2023
8cd4990
add stale action to pipeline template, not mandatory
mirpedrol Feb 16, 2023
5019312
update changelog
mirpedrol Feb 16, 2023
a1645da
try fixing pytest GHA
mirpedrol Feb 17, 2023
49c8317
Merge branch 'dev' into stale-action
mirpedrol Mar 29, 2023
958a889
[automated] Fix code linting
nf-core-bot Mar 30, 2023
bbf15f3
Merge branch 'dev' into stale-action
mirpedrol Mar 30, 2023
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1 change: 1 addition & 0 deletions .github/workflows/pytest-frozen-ubuntu-20.04.yml
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Expand Up @@ -33,6 +33,7 @@ jobs:

- name: Downgrade git to the Ubuntu official repository's version
run: |
sudo apt update
sudo apt remove git git-man
sudo add-apt-repository --remove ppa:git-core/ppa
sudo apt install git
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24 changes: 24 additions & 0 deletions .github/workflows/stale.yml
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@@ -0,0 +1,24 @@
name: "Close stale issues and stale PRs"
on:
schedule:
- cron: "30 1 * * 7" # Once a week

jobs:
stale:
runs-on: ubuntu-latest
permissions:
issues: write
pull-requests: write
steps:
- uses: actions/stale@v7
with:
stale-issue-message: "This issue is stale because it has been inactive for more than 30 days. More information is required. Remove stale label or comment or this will be closed in 20 days."
stale-pr-message: "This PR is stale because it has been open more than 45 days with no activity. Remove stale label or comment if it is still useful. In any case a PR will be automatically closed."
close-issue-message: "This issue was closed because it has been stalled for 20 days with no activity."
days-before-stale: 30
days-before-close: 20
days-before-pr-close: -1
any-of-labels: "awaiting-changes,awaiting-feedback"
exempt-issue-labels: "WIP"
exempt-pr-labels: "WIP"
repo-token: ${{ secrets.GITHUB_TOKEN }}
2 changes: 2 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -7,6 +7,7 @@
- Turn on automatic clean up of intermediate files in `work/` on successful pipeline completion in full-test config ([#2163](https://github.com/nf-core/tools/pull/2163)) [Contributed by @jfy133]
- Add documentation to `usage.md` on how to use `params.yml` files, based on nf-core/ampliseq text ([#2173](https://github.com/nf-core/tools/pull/2173/)) [Contributed by @jfy133, @d4straub]
- Make jobs automatically resubmit for a much wider range of exit codes (now `104` and `130..145`) ([#2170](https://github.com/nf-core/tools/pull/2170))
- Add a stale GHA wich stale + close issues and stale PRs with specific labels ([#2183](https://github.com/nf-core/tools/pull/2183))
- Remove problematic sniffer code in samplesheet_check.py that could give false positive 'missing header' errors ([https://github.com/nf-core/tools/pull/2194]) [Contributed by @Midnighter, @jfy133]
- Consistent syntax for branch checks in PRs ([#2202](https://github.com/nf-core/tools/issues/2202))
- Fixed minor Jinja2 templating bug that caused the PR template to miss a newline
Expand All @@ -30,6 +31,7 @@
### General

- `nf-core modules/subworkflows info` now prints the include statement for the module/subworkflow ([#2182](https://github.com/nf-core/tools/pull/2182)).
- Add a stale GHA wich stale + close issues and stale PRs with specific labels ([#2183](https://github.com/nf-core/tools/pull/2183))
- update minimum version of rich to 13.3.1 ([#2185](https://github.com/nf-core/tools/pull/2185))
- Add the Nextflow version to Gitpod container matching the minimal Nextflow version for nf-core (according to `nextflow.config`) ([#2196](https://github.com/nf-core/tools/pull/2196))
- Use `nfcore/gitpod:dev` container in the dev branch ([#2196](https://github.com/nf-core/tools/pull/2196))
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24 changes: 24 additions & 0 deletions nf_core/pipeline-template/.github/workflows/stale.yml
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Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
name: "Close stale issues and stale PRs"
on:
schedule:
- cron: "30 1 * * 7" # Once a week

jobs:
stale:
runs-on: ubuntu-latest
permissions:
issues: write
pull-requests: write
steps:
- uses: actions/stale@v7
with:
stale-issue-message: "This issue is stale because it has been inactive for more than 30 days. More information is required. Remove stale label or comment or this will be closed in 20 days."
stale-pr-message: "This PR is stale because it has been open more than 45 days with no activity. Remove stale label or comment if it is still useful. In any case a PR will be automatically closed."
close-issue-message: "This issue was closed because it has been stalled for 20 days with no activity."
days-before-stale: 30
days-before-close: 20
days-before-pr-close: -1
any-of-labels: "awaiting-changes,awaiting-feedback"
exempt-issue-labels: "WIP"
exempt-pr-labels: "WIP"
repo-token: ${{ secrets.GITHUB_TOKEN }}