Refgenie alias translation #2242
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Codecov Report
@@ Coverage Diff @@
## dev #2242 +/- ##
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+ Coverage 73.04% 73.07% +0.02%
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Files 77 77
Lines 8344 8364 +20
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+ Hits 6095 6112 +17
- Misses 2249 2252 +3
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mashehu
approved these changes
Apr 25, 2023
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Solves the problem reported on slack.
When the asset alias in a refgenie server is different to the one the nf-core pipeline expects, assets aren't detected. This allows having a translation files to automatically translate refgenie aliases to the ones used in nf-core.
Docs: nf-core/website#1754
PR checklist
CHANGELOG.mdis updateddocsis updated