Thanks to visit codestin.com
Credit goes to github.com

Skip to content

Conversation

@mirpedrol
Copy link
Member

@mirpedrol mirpedrol commented Aug 7, 2023

When customizing the pipeline template, information was saved to a file named pipeline_template.yml. This PR deprecates such file and stores the info to .nf-core.yml instead.

Partially close #2359 (needs a follow-up PR moving data from pipeline_tamplate.yml in old pipelines)

PR checklist

  • This comment contains a description of changes (with reason)
  • CHANGELOG.md is updated
  • If you've fixed a bug or added code that should be tested, add tests!
  • Documentation in docs is updated

@codecov
Copy link

codecov bot commented Aug 7, 2023

Codecov Report

Merging #2388 (e8c289e) into dev (13f331e) will increase coverage by 0.01%.
Report is 6 commits behind head on dev.
The diff coverage is 100.00%.

@@            Coverage Diff             @@
##              dev    #2388      +/-   ##
==========================================
+ Coverage   71.05%   71.06%   +0.01%     
==========================================
  Files          87       87              
  Lines        9382     9384       +2     
==========================================
+ Hits         6666     6669       +3     
+ Misses       2716     2715       -1     
Files Changed Coverage Δ
nf_core/lint/files_exist.py 78.00% <ø> (ø)
nf_core/create.py 83.03% <100.00%> (+0.12%) ⬆️

... and 1 file with indirect coverage changes

@mirpedrol mirpedrol merged commit 65b4b5f into nf-core:dev Aug 7, 2023
@mirpedrol mirpedrol deleted the save-template-info branch August 7, 2023 10:30
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants