nf-core · sven1103 · Feb 8, 2019 · Oct 5, 2018 · Jan 7, 2019 · Jan 8, 2019
diff --git a/.travis.yml b/.travis.yml
@@ -21,12 +21,12 @@ install:
   - cd ${TRAVIS_BUILD_DIR}
   - pip install --upgrade pip # Get rid of dependency resolve issues from older pip versions
   - pip install .
-  - pip install codecov 'pytest==3.6.4' pytest-datafiles pytest-cov mock
-  - pip install Sphinx sphinxcontrib-napoleon  # For autodoc generation
+  - pip install codecov 'pytest==3.6.4' pytest-datafiles pytest-cov mock jsonschema
+  - pip install Sphinx sphinxcontrib-napoleon # For autodoc generation
   - sudo apt-get install npm && npm install -g markdownlint-cli # For documentation linting
 
 script:
-  - python -m pytest --cov=nf_core .
+  - pytest --cov=nf_core .
   - nf-core create -n testpipeline -d "This pipeline is for testing" -a "Testing McTestface"
   - nf-core lint nf-core-testpipeline
   - markdownlint . -c ${TRAVIS_BUILD_DIR}/.github/markdownlint.yml

diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -8,6 +8,7 @@
 * Changed default container tag from latest to dev
 
 #### Tools helper code
+* New `nf-core launch` command to interactively launch nf-core pipelines from command-line
 * Drop Python 3.4 support
 * `nf-core list` now only shows a value for _"is local latest version"_ column if there is a local copy.
 * `nf-core lint` now properly searches for conda packages in default channels
@@ -17,11 +18,13 @@
 * Syncing now reads from a `blacklist.json` in order to exclude pipelines from being synced if necessary.
 * Added nf-core tools API description to assist developers with the classes and functions available.
   * Docs are automatically built by Travis CI and updated on the nf-co.re website.
-* Introduced test for filtering remote workflows by keyword
+* Introduced test for filtering remote workflows by keyword.
 * Build tools python API docs
   * Use Travis job for api doc generation and publish
 * Bump `conda` to 4.5.12 in base nf-core Dockerfile
 * `nf-core bump-version` now stops before making changes if the linting fails
+* Code test coverage
+  * Introduced test for filtering remote workflows by keyword
 
 
 ## [v1.4](https://github.com/nf-core/tools/releases/tag/1.4) - 2018-12-12 Tantalum Butterfly

diff --git a/docs/api/_src/index.rst b/docs/api/_src/index.rst
@@ -17,6 +17,7 @@ Welcome to nf-core tools API documentation!
    lint
    list
    utils
+   workflow
 
 
 Indices and tables

diff --git a/docs/api/_src/workflow.rst b/docs/api/_src/workflow.rst
@@ -0,0 +1,5 @@
+nf_core.list
+============
+
+.. automodule:: nf_core.workflow
+    :members:
-Original file line number
+Diff line change
@@ Expand Up / @@ -17,6 +17,7 @@ Welcome to nf-core tools API documentation! @@
        lint
        list
        utils
+       workflow
     Indices and tables
@@ Expand Down @@