Amplicon genome assembly for ARTIC style primer schemes using Nextflow.

Tools for working with primerbed files

Conda recipes for the bioconda channel.

Repository to host tool-specific module files for the Nextflow DSL2 community!

visualise amplicon genome coverage by bokeh using mosdepth output

Python package with helper tools for the nf-core community.

Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the …

A cross-platform, efficient and practical CSV/TSV toolkit in Golang

DupRecover - a Maximum Likelihood estimator for sampling-induced read duplication in deep sequencing experiments.

Detect iSNV and construct whole viral genomes from metagenomic samples

Create ggplot maps from a column of place names

A DSL for data-driven computational pipelines

Tool Shed repositories maintained by the Intergalactic Utilities Commission

Metagenomic diagnostics stack for low abundance sample types and clinical reporting

Auto_Jobs_Applier_AI_Agent aims to easy job hunt process by automating the job application process. Utilizing artificial intelligence, it enables users to apply for multiple jobs in an automated an…

ARTIC Epi2me compatible workflow and reporting

Drug Resistance Genotyping of antiviral treated Herpesviruses

LoFreq Star: Sensitive variant calling from sequencing data

µbinfie blog